RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 PARD6BQ9BYG5 372 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 TREHO43280 583 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 PIGRP01833 764 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 RRM1P23921 792 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 CNTFP26441 200 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 TYK2P29597 1187 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 MAPRE2Q15555 327 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 TSNAXIP1Q2TAA8 658 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 ATAT1Q5SQI0 421 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 SPOCD1Q6ZMY3 1216 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 UHMK1Q8TAS1 419 aaKnown RBP13.24□□□□□ -0.29
CCDC149-201ENST00000324309 GIPC2Q8TF65 315 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 ZBTB45Q96K62 511 aaPredicted RBP13.24□□□□□ -0.29
CCDC149-201ENST00000324309 LHX5Q9H2C1 402 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 SCN7AQ01118 1682 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 THSD7AQ9UPZ6 1657 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 NVLO15381 856 aaKnown RBP13.24□□□□□ -0.29
CCDC149-201ENST00000324309 ATP9BO43861 1147 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 CALRP27797 417 aaKnown RBP13.24□□□□□ -0.29
CCDC149-201ENST00000324309 AARSP49588 968 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCDC149-201ENST00000324309 MON1AQ86VX9 555 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 ARHGEF2Q92974 986 aaKnown RBP13.24□□□□□ -0.29
CCDC149-201ENST00000324309 TATDN2Q93075 761 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 NTPCRQ9BSD7 190 aaKnown RBP13.24□□□□□ -0.29
CCDC149-201ENST00000324309 DDX47Q9H0S4 455 aaKnown RBP13.24□□□□□ -0.29
CCDC149-201ENST00000324309 SEPT3Q9UH03 358 aa13.24□□□□□ -0.29
CCDC149-201ENST00000324309 RBAK-RBAKDNI3L0D1 243 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 ALDH1A2O94788 518 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 ACSL3O95573 720 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 DDX6P26196 483 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCDC149-201ENST00000324309 SNX19Q92543 992 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 MYLPFQ96A32 169 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 PURBQ96QR8 312 aaKnown RBP13.23□□□□□ -0.29
CCDC149-201ENST00000324309 KDM4CQ9H3R0 1056 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 PDZD7Q9H5P4 517 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 ITGB4P16144 1822 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 ERI2A8K979 691 aaKnown RBP13.23□□□□□ -0.29
CCDC149-201ENST00000324309 C1QTNF3-AMACRE9PGA6 284 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 KLRC4O43908 158 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 OPHN1O60890 802 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 CCZ1BP86790 482 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 CCZ1P86791 482 aaPredicted RBP13.23□□□□□ -0.29
CCDC149-201ENST00000324309 CCNG2Q16589 344 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 FAM46CQ5VWP2 391 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 EFHD1Q9BUP0 239 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 VPS11Q9H270 941 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 ADAM28Q9UKQ2 775 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 SIGLEC16A6NMB1 481 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 ATP1A1P05023 1023 aaKnown RBP13.23□□□□□ -0.29
CCDC149-201ENST00000324309 APRTP07741 180 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 SERPINF2P08697 491 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 COILP38432 576 aaPredicted RBP13.23□□□□□ -0.29
CCDC149-201ENST00000324309 SNX27Q96L92 541 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 NMRK1Q9NWW6 199 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 COL20A1Q9P218 1284 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 ZNF839A8K0R7 811 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 RASA4BC9J798 803 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 RASA4O43374 803 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 NCK2O43639 380 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 BRAFP15056 766 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 BDNFP23560 247 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 DBN1Q16643 649 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 MARC1Q5VT66 337 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 TRIM48Q8IWZ4 208 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 SUSD6Q92537 303 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 E2F7Q96AV8 911 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 MCCC1Q96RQ3 725 aaPredicted RBP13.23□□□□□ -0.29
CCDC149-201ENST00000324309 SLC9A7Q96T83 725 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 ACBD6Q9BR61 282 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 DUSP16Q9BY84 665 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 IGFLR1Q9H665 355 aa13.23□□□□□ -0.29
CCDC149-201ENST00000324309 H2AFYO75367 372 aaKnown RBP13.22□□□□□ -0.29
CCDC149-201ENST00000324309 TTC31Q49AM3 519 aaPredicted RBP13.22□□□□□ -0.29
CCDC149-201ENST00000324309 SLC47A2Q86VL8 602 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 PHF13Q86YI8 300 aaPredicted RBP13.22□□□□□ -0.29
CCDC149-201ENST00000324309 MMGT1Q8N4V1 131 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 IPMKQ8NFU5 416 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 ACTRT1Q8TDG2 376 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 HGSO14964 777 aaPredicted RBP13.22□□□□□ -0.29
CCDC149-201ENST00000324309 CSDE1O75534 798 aaKnown RBP13.22□□□□□ -0.29
CCDC149-201ENST00000324309 PDCLQ13371 301 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 TTC7AQ9ULT0 858 aaPredicted RBP13.22□□□□□ -0.29
CCDC149-201ENST00000324309 PLAAQ9Y263 795 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 TMEM150BA6NC51 233 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 ESRRBO95718 433 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 F2P00734 622 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 NAB1Q13506 487 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 EPM2AIP1Q7L775 607 aaPredicted RBP13.22□□□□□ -0.29
CCDC149-201ENST00000324309 GRAMD1AQ96CP6 724 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 FUBP3Q96I24 572 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCDC149-201ENST00000324309 NEU2Q9Y3R4 380 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 ADGRA2Q96PE1 1338 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 BTNL10A8MVZ5 291 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 HIST2H2ACQ16777 129 aaPredicted RBP13.22□□□□□ -0.29
CCDC149-201ENST00000324309 THEMIS2Q5TEJ8 643 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 HIST2H2AA3Q6FI13 130 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 NOP9Q86U38 636 aaKnown RBP13.22□□□□□ -0.29
CCDC149-201ENST00000324309 USP33Q8TEY7 942 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 CCDC126Q96EE4 140 aa13.22□□□□□ -0.29
CCDC149-201ENST00000324309 STAMBPL1Q96FJ0 436 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms