RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SNX3O60493 162 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 ADORA2AP29274 412 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 N4BP2L1Q5TBK1 243 aaPredicted RBP17.03■□□□□ 0.32
CLIP4-201ENST00000320081 TEX9Q8N6V9 391 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 PPHLN1Q8NEY8 458 aaKnown RBP17.03■□□□□ 0.32
CLIP4-201ENST00000320081 ENTPD5O75356 428 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 ERVK-10P10266 1014 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 MAPTP10636 758 aaKnown RBP17.03■□□□□ 0.32
CLIP4-201ENST00000320081 RPL22P35268 128 aaKnown RBP17.03■□□□□ 0.32
CLIP4-201ENST00000320081 PDAP1Q13442 181 aaKnown RBP17.03■□□□□ 0.32
CLIP4-201ENST00000320081 RBBP7Q16576 425 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 SPDYAQ5MJ70 313 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 ERMARDQ5T6L9 678 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 MTHFD1LQ6UB35 978 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 PGM2Q96G03 612 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 CENPKQ9BS16 269 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 NR2E3Q9Y5X4 410 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 UBR1Q8IWV7 1749 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 SDR42E2A6NKP2 422 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 FCHO1O14526 889 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 PHGDHO43175 533 aaKnown RBP17.03■□□□□ 0.32
CLIP4-201ENST00000320081 MCL1Q07820 350 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 PTAR1Q7Z6K3 402 aaPredicted RBP17.03■□□□□ 0.32
CLIP4-201ENST00000320081 YY1AP1Q9H869 796 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 GOLGA2P5Q9HBQ8 144 aa17.03■□□□□ 0.32
CLIP4-201ENST00000320081 FBXO6Q9NRD1 293 aaPredicted RBP17.03■□□□□ 0.32
CLIP4-201ENST00000320081 RP1L1Q8IWN7 2480 aaPredicted RBP17.03■□□□□ 0.32
CLIP4-201ENST00000320081 NOMO3P69849 1222 aa17.02■□□□□ 0.32
CLIP4-201ENST00000320081 CSHL1Q14406 222 aa17.02■□□□□ 0.32
CLIP4-201ENST00000320081 SV2CQ496J9 727 aa17.02■□□□□ 0.32
CLIP4-201ENST00000320081 APOL5Q9BWW9 433 aa17.02■□□□□ 0.32
CLIP4-201ENST00000320081 BARX2Q9UMQ3 279 aaPredicted RBP17.02■□□□□ 0.32
CLIP4-201ENST00000320081 FAM237BA0A1B0GVD1 139 aa17.02■□□□□ 0.32
CLIP4-201ENST00000320081 RECQL4O94761 1208 aa17.02■□□□□ 0.32
CLIP4-201ENST00000320081 GHRP10912 638 aa17.02■□□□□ 0.32
CLIP4-201ENST00000320081 GRIK4Q16099 956 aa17.02■□□□□ 0.32
CLIP4-201ENST00000320081 UNC45BQ8IWX7 931 aa17.02■□□□□ 0.32
CLIP4-201ENST00000320081 RIBC1Q8N443 379 aaPredicted RBP17.02■□□□□ 0.32
CLIP4-201ENST00000320081 EMID1Q96A84 441 aaPredicted RBP17.02■□□□□ 0.32
CLIP4-201ENST00000320081 IGLV3-22A0A075B6J6 115 aa17.02■□□□□ 0.31
CLIP4-201ENST00000320081 COPAP53621 1224 aa17.02■□□□□ 0.31
CLIP4-201ENST00000320081 FSTL1Q12841 308 aa17.02■□□□□ 0.31
CLIP4-201ENST00000320081 FUT11Q495W5 492 aa17.02■□□□□ 0.31
CLIP4-201ENST00000320081 IYDQ6PHW0 289 aa17.02■□□□□ 0.31
CLIP4-201ENST00000320081 GAD1Q99259 594 aa17.02■□□□□ 0.31
CLIP4-201ENST00000320081 MAGEB5Q9BZ81 275 aa17.02■□□□□ 0.31
CLIP4-201ENST00000320081 DDX43Q9NXZ2 648 aaKnown RBP17.02■□□□□ 0.31
CLIP4-201ENST00000320081 RUVBL2Q9Y230 463 aaKnown RBP17.02■□□□□ 0.31
CLIP4-201ENST00000320081 CHRM3P20309 590 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 KDELR1P24390 212 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 SERPINB9P50453 376 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 TREML2Q5T2D2 321 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 LGMNQ99538 433 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 MAN1C1Q9NR34 630 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 PCSK1P29120 753 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 EFEMP1Q12805 493 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 C15orf52Q6ZUT6 534 aaKnown RBP17.01■□□□□ 0.31
CLIP4-201ENST00000320081 SPATA6LQ8N4H0 392 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 CDT1Q9H211 546 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 DCXO43602 365 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 RALBP11234 206 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 DPYSL3Q14195 570 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 GLB1LQ6UWU2 654 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 SHCBP1Q8NEM2 672 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 AGAP11Q8TF27 550 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 DIS3LQ8TF46 1054 aaKnown RBP17.01■□□□□ 0.31
CLIP4-201ENST00000320081 RXFP1Q9HBX9 757 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 SHOC2Q9UQ13 582 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 ERI2A8K979 691 aaKnown RBP17.01■□□□□ 0.31
CLIP4-201ENST00000320081 ANGPT2O15123 496 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 NDUFS3O75489 264 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 C3orf20Q8ND61 904 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 ERLEC1Q96DZ1 483 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 SLITRK1Q96PX8 696 aa17.01■□□□□ 0.31
CLIP4-201ENST00000320081 ARHGEF37A1IGU5 675 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 CLDN5O00501 218 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 USP17L7P0C7H9 530 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 FLOT2Q14254 428 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 COL1A1P02452 1464 aaPredicted RBP17■□□□□ 0.31
CLIP4-201ENST00000320081 ZC3H4Q9UPT8 1303 aaKnown RBP17■□□□□ 0.31
CLIP4-201ENST00000320081 SUPT3HB4E1H0 165 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 FAM155BO75949 473 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 VAPBO95292 243 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 MSX2P35548 267 aaPredicted RBP17■□□□□ 0.31
CLIP4-201ENST00000320081 BCAT1P54687 386 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 ITIH4Q14624 930 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 RARS2Q5T160 578 aaKnown RBP17■□□□□ 0.31
CLIP4-201ENST00000320081 MFSD14CQ5VZR4 134 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 A8MUI8 341 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 RNF103O00237 685 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 RABGGTBP53611 331 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 MPP3Q13368 585 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 DEFB107AQ8IZN7 70 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 DAW1Q8N136 415 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 LRRC57Q8N9N7 239 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 GANCQ8TET4 914 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 MUC3BQ9H195 1237 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 NT5MQ9NPB1 228 aa17■□□□□ 0.31
CLIP4-201ENST00000320081 PDHXO00330 501 aa16.99■□□□□ 0.31
CLIP4-201ENST00000320081 CD48P09326 243 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms