RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 DEFB103AP81534 67 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 CAV1Q03135 178 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 FAM171A1Q5VUB5 890 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 FUT10Q6P4F1 479 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 MICALCLQ6ZW33 695 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 SCUBE3Q8IX30 993 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 EMC1Q8N766 993 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 EXD1Q8NHP7 514 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 KCTD13Q8WZ19 329 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 SNF8Q96H20 258 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 TMEM209Q96SK2 561 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 STMN4Q9H169 189 aaPredicted RBP13.21□□□□□ -0.29
PTPN6-201ENST00000318974 GGA2Q9UJY4 613 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 GMNCA6NCL1 334 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 TRIM66O15016 1216 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 SCNN1AP37088 669 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 CETN2P41208 172 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 SSR1P43307 286 aaKnown RBP13.21□□□□□ -0.29
PTPN6-201ENST00000318974 TAS2R40P59535 323 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 CCNG2Q16589 344 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 VARS2Q5ST30 1063 aaKnown RBP13.21□□□□□ -0.29
PTPN6-201ENST00000318974 LRRTM3Q86VH5 581 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 CEP57Q86XR8 500 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 CCDC50Q8IVM0 306 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 CENPTQ96BT3 561 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 PIWIL1Q96J94 861 aaKnown RBP13.21□□□□□ -0.29
PTPN6-201ENST00000318974 SMOQ99835 787 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 GPR62Q9BZJ7 368 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 CWH43Q9H720 699 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 LRRC4Q9HBW1 653 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 TMLHEQ9NVH6 421 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 ASIC3Q9UHC3 531 aa13.21□□□□□ -0.29
PTPN6-201ENST00000318974 F8VP50 259 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 RGS16O15492 202 aaPredicted RBP13.2□□□□□ -0.3
PTPN6-201ENST00000318974 AGTP01019 485 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 RALAP11233 206 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 GPD1P21695 349 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 PBX3P40426 434 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 ALDH7A1P49419 539 aaKnown RBP13.2□□□□□ -0.3
PTPN6-201ENST00000318974 SEC24CP53992 1094 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 SNX1Q13596 522 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 DAB2IPQ5VWQ8 1189 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 RHBDF2Q6PJF5 856 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 DCP1BQ8IZD4 617 aaKnown RBP13.2□□□□□ -0.3
PTPN6-201ENST00000318974 ZNF689Q96CS4 500 aaPredicted RBP13.2□□□□□ -0.3
PTPN6-201ENST00000318974 HERPUD2Q9BSE4 406 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 OSBPL8Q9BZF1 889 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 ROPN1BQ9BZX4 212 aaPredicted RBP13.2□□□□□ -0.3
PTPN6-201ENST00000318974 ROPN1Q9HAT0 212 aaPredicted RBP13.2□□□□□ -0.3
PTPN6-201ENST00000318974 LRRC4CQ9HCJ2 640 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 CSNK1G1Q9HCP0 422 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 PPANQ9NQ55 473 aaKnown RBP13.2□□□□□ -0.3
PTPN6-201ENST00000318974 TSC2P49815 1807 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 A0A087WUV0 522 aaPredicted RBP13.2□□□□□ -0.3
PTPN6-201ENST00000318974 C2CD4BA6NLJ0 364 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 TP73O15350 636 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 FGFR3P22607 806 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 BDNFP23560 247 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 IVDP26440 423 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 ADIGQ0VDE8 80 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 PPIGQ13427 754 aaKnown RBP eCLIP13.2□□□□□ -0.34e-9■■■■■ 35.5
PTPN6-201ENST00000318974 MRPL58Q14197 206 aaKnown RBP13.2□□□□□ -0.3
PTPN6-201ENST00000318974 ACAP1Q15027 740 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 LLGL1Q15334 1064 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 ZNF280DQ6N043 979 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 FAM117BQ6P1L5 589 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 C4orf50Q6ZRC1 276 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 SPATA2LQ8IUW3 424 aaPredicted RBP13.2□□□□□ -0.3
PTPN6-201ENST00000318974 BBOF1Q8ND07 529 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 ZMIZ2Q8NF64 920 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 RXFP2Q8WXD0 754 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 ATG4AQ8WYN0 398 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 ZCWPW1Q9H0M4 648 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 ASNSD1Q9NWL6 643 aa13.2□□□□□ -0.3
PTPN6-201ENST00000318974 MICAL3Q7RTP6 2002 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 GRAP2O75791 330 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 PDGFRAP16234 1089 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 MMP13P45452 471 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 ZNF143P52747 638 aaPredicted RBP13.19□□□□□ -0.3
PTPN6-201ENST00000318974 TAF5Q15542 800 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 CTXN3Q4LDR2 81 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 SPOUT1Q5T280 376 aaKnown RBP13.19□□□□□ -0.3
PTPN6-201ENST00000318974 LRRC38Q5VT99 294 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 SLC26A9Q7LBE3 791 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 OTOP2Q7RTS6 562 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 YTHDF3Q7Z739 585 aaKnown RBP13.19□□□□□ -0.3
PTPN6-201ENST00000318974 TMEM173Q86WV6 379 aaPredicted RBP13.19□□□□□ -0.3
PTPN6-201ENST00000318974 CCDC89Q8N998 374 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 CLEC4CQ8WTT0 213 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 PPM1EQ8WY54 764 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 KHSRPQ92945 711 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTPN6-201ENST00000318974 RBM41Q96IZ5 413 aaKnown RBP13.19□□□□□ -0.3
PTPN6-201ENST00000318974 CCDC114Q96M63 670 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 KCNK16Q96T55 309 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 OR6C75A6NL08 312 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 RASGRF2O14827 1237 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 RNF8O76064 485 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 OR4Q2P0C623 313 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 ATF2P15336 505 aa13.19□□□□□ -0.3
PTPN6-201ENST00000318974 CACNA2D1P54289 1103 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms