RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 E7ENQ6 273 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 KRT14P02533 472 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 IVDP26440 423 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 GJA8P48165 433 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 GATMP50440 423 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 OTUD4Q01804 1114 aaKnown RBP17.44■□□□□ 0.38
CLCF1-201ENST00000312438 DHX9Q08211 1270 aaKnown RBP17.44■□□□□ 0.38
CLCF1-201ENST00000312438 MMRN1Q13201 1228 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 MTMR3Q13615 1198 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 BNIPLQ7Z465 357 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 PSTKQ8IV42 348 aaKnown RBP17.44■□□□□ 0.38
CLCF1-201ENST00000312438 ALLCQ8N6M5 410 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 ANKLE1Q8NAG6 615 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 HAUS1Q96CS2 278 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 SNF8Q96H20 258 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 ZNF670Q9BS34 389 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 PCDH18Q9HCL0 1135 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 TMEM39AQ9NV64 488 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 TBX21Q9UL17 535 aa17.44■□□□□ 0.38
CLCF1-201ENST00000312438 TBKBP1A7MCY6 615 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 AGPSO00116 658 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 PPFIA2O75334 1257 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 ATF2P15336 505 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 GGCXP38435 758 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 ATXN1P54253 815 aaKnown RBP17.43■□□□□ 0.38
CLCF1-201ENST00000312438 CAV1Q03135 178 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 IKBKEQ14164 716 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 MRPL58Q14197 206 aaKnown RBP17.43■□□□□ 0.38
CLCF1-201ENST00000312438 TRIP13Q15645 432 aaPredicted RBP17.43■□□□□ 0.38
CLCF1-201ENST00000312438 DPYSL2Q16555 572 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 NFE2Q16621 373 aaPredicted RBP17.43■□□□□ 0.38
CLCF1-201ENST00000312438 ANKRD20A8PQ5CZ79 823 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 SPDYCQ5MJ68 293 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 SYPL2Q5VXT5 272 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 HFE2Q6ZVN8 426 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 TMC3Q7Z5M5 1100 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.43■□□□□ 0.38
CLCF1-201ENST00000312438 DIS3LQ8TF46 1054 aaKnown RBP17.43■□□□□ 0.38
CLCF1-201ENST00000312438 ARMC5Q96C12 935 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 GPATCH2LQ9NWQ4 482 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 RRN3Q9NYV6 651 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 SAE1Q9UBE0 346 aaPredicted RBP17.43■□□□□ 0.38
CLCF1-201ENST00000312438 NAALADL1Q9UQQ1 740 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 ATP11BQ9Y2G3 1177 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 USP3Q9Y6I4 520 aa17.43■□□□□ 0.38
CLCF1-201ENST00000312438 H3BQF6 201 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 M0QYT0 321 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 LTFP02788 710 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 FYNP06241 537 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 KLRC2P26717 231 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 OAS2P29728 719 aaKnown RBP17.42■□□□□ 0.38
CLCF1-201ENST00000312438 L1CAMP32004 1257 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 RDXP35241 583 aaKnown RBP17.42■□□□□ 0.38
CLCF1-201ENST00000312438 GRIK1P39086 918 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 SLC11A1P49279 550 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 ELAVL2Q12926 359 aaKnown RBP17.42■□□□□ 0.38
CLCF1-201ENST00000312438 PKN2Q16513 984 aaKnown RBP17.42■□□□□ 0.38
CLCF1-201ENST00000312438 CA9Q16790 459 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 SLC39A12Q504Y0 691 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 VARS2Q5ST30 1063 aaKnown RBP17.42■□□□□ 0.38
CLCF1-201ENST00000312438 FAM171A1Q5VUB5 890 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 RUFY1Q96T51 708 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 CALCOCO1Q9P1Z2 691 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 AP4E1Q9UPM8 1137 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 OPA1O60313 960 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 SYF2O95926 243 aaKnown RBP17.42■□□□□ 0.38
CLCF1-201ENST00000312438 GALTP07902 379 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 NCAM1P13591 858 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 RFC2P35250 354 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 HSD17B3P37058 310 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 DEUP1Q05D60 604 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 CNKSR3Q6P9H4 555 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 CEP57Q86XR8 500 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 PIK3R5Q8WYR1 880 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 P3H4Q92791 437 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 FAF2Q96CS3 445 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 FUBP3Q96I24 572 aaKnown RBP eCLIP17.42■□□□□ 0.38
CLCF1-201ENST00000312438 ZIM3Q96PE6 472 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 SLC9A7Q96T83 725 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 TMEM121Q9BTD3 319 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 TRIM62Q9BVG3 475 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 TXLNGYQ9BZA5 131 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 GPR62Q9BZJ7 368 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 TSPYL1Q9H0U9 437 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 DHX35Q9H5Z1 703 aaKnown RBP17.42■□□□□ 0.38
CLCF1-201ENST00000312438 MARCH5Q9NX47 278 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 FZD10Q9ULW2 581 aa17.42■□□□□ 0.38
CLCF1-201ENST00000312438 TDRD15B5MCY1 1934 aaKnown RBP17.41■□□□□ 0.38
CLCF1-201ENST00000312438 SF3B1O75533 1304 aaKnown RBP eCLIP17.41■□□□□ 0.38
CLCF1-201ENST00000312438 OR6C75A6NL08 312 aa17.41■□□□□ 0.38
CLCF1-201ENST00000312438 CLTBP09497 229 aa17.41■□□□□ 0.38
CLCF1-201ENST00000312438 OR4Q2P0C623 313 aa17.41■□□□□ 0.38
CLCF1-201ENST00000312438 FGFR3P22607 806 aa17.41■□□□□ 0.38
CLCF1-201ENST00000312438 CYP2F1P24903 491 aa17.41■□□□□ 0.38
CLCF1-201ENST00000312438 FAM193AP78312 1265 aa17.41■□□□□ 0.38
CLCF1-201ENST00000312438 SLMAPQ14BN4 828 aa17.41■□□□□ 0.38
CLCF1-201ENST00000312438 CTXN3Q4LDR2 81 aa17.41■□□□□ 0.38
CLCF1-201ENST00000312438 PPP6R3Q5H9R7 873 aaPredicted RBP17.41■□□□□ 0.38
CLCF1-201ENST00000312438 SLC9A4Q6AI14 798 aa17.41■□□□□ 0.38
CLCF1-201ENST00000312438 BHLHA9Q7RTU4 235 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms