RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 SERPINE1P05121 402 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 NCF1P14598 390 aaPredicted RBP14.09□□□□□ -0.15
CLCN6-201ENST00000312413 TPP2P29144 1249 aaPredicted RBP14.09□□□□□ -0.15
CLCN6-201ENST00000312413 BFSP2Q13515 415 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 MTMR2Q13614 643 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 ZNF571Q7Z3V5 609 aaPredicted RBP14.09□□□□□ -0.15
CLCN6-201ENST00000312413 STKLD1Q8NE28 680 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 FUCA2Q9BTY2 467 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 ZNF518BQ9C0D4 1074 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 SERHL2Q9H4I8 314 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 SERHLQ9NQF3 203 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 SHOC2Q9UQ13 582 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 DRG1Q9Y295 367 aaKnown RBP14.09□□□□□ -0.15
CLCN6-201ENST00000312413 RRM1P23921 792 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 PRKAA1Q13131 559 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 ARMC3Q5W041 872 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 OR6Y1Q8NGX8 325 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 ZNF483Q8TF39 744 aaPredicted RBP14.09□□□□□ -0.15
CLCN6-201ENST00000312413 SHROOM2Q13796 1616 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 ITGB3P05106 788 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 MGAT5Q09328 741 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 DDR2Q16832 855 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 DGUOKQ16854 277 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 C2CD6Q53TS8 623 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 OTUD3Q5T2D3 398 aaPredicted RBP14.09□□□□□ -0.15
CLCN6-201ENST00000312413 C11orf96Q7Z7L8 435 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 C2orf69Q8N8R5 385 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 SEPHS2Q99611 448 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 HDHD2Q9H0R4 259 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 SAR1AQ9NR31 198 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 PIM2Q9P1W9 311 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 CROTQ9UKG9 612 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 PNPLA4P41247 253 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 ALDH5A1P51649 535 aaPredicted RBP14.09□□□□□ -0.15
CLCN6-201ENST00000312413 TYW3Q6IPR3 259 aaKnown RBP14.09□□□□□ -0.15
CLCN6-201ENST00000312413 RIPOR1Q6ZS17 1223 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 YIPF2Q9BWQ6 316 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 PCDH9Q9HC56 1237 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 GPAMQ9HCL2 828 aa14.09□□□□□ -0.15
CLCN6-201ENST00000312413 A0A087WXM4 84 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 LDLRP01130 860 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 SLC1A6P48664 564 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 HARS2P49590 506 aaKnown RBP14.08□□□□□ -0.16
CLCN6-201ENST00000312413 COX10Q12887 443 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 ZNF772Q68DY9 489 aaPredicted RBP14.08□□□□□ -0.16
CLCN6-201ENST00000312413 C11orf88Q6PI97 169 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 CDH24Q86UP0 819 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 SLC22A9Q8IVM8 553 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 FAM45AQ8TCE6 357 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 TCP10LQ8TDR4 215 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 ITGB1BP2Q9UKP3 347 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 PGS1Q32NB8 556 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 ERO1BQ86YB8 467 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 CROCCP3Q8IVE0 287 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 SP8Q8IXZ3 490 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 SEPT5Q99719 369 aaPredicted RBP14.08□□□□□ -0.16
CLCN6-201ENST00000312413 RUSC1Q9BVN2 902 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 KCNH7Q9NS40 1196 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 THAP1Q9NVV9 213 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 NFKBIL1Q9UBC1 381 aaPredicted RBP14.08□□□□□ -0.16
CLCN6-201ENST00000312413 NPM3O75607 178 aaKnown RBP14.08□□□□□ -0.16
CLCN6-201ENST00000312413 SLC2A3P11169 496 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 ADRA2BP18089 450 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 ME2P23368 584 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 GPC1P35052 558 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 XRCC4Q13426 336 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 SPANXN2Q5MJ10 180 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 TMEM26Q6ZUK4 368 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 GANQ9H2C0 597 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 KBTBD4Q9NVX7 518 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 KDM6BO15054 1643 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 ATG7O95352 703 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 ATP5BP06576 529 aaKnown RBP14.08□□□□□ -0.16
CLCN6-201ENST00000312413 GSTM1P09488 218 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 DPP10Q8N608 796 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 SETD9Q8NE22 299 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 WDR36Q8NI36 951 aaKnown RBP14.08□□□□□ -0.16
CLCN6-201ENST00000312413 MYLK2Q9H1R3 596 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 SEMA6BQ9H3T3 888 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 POLG2Q9UHN1 485 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 KIAA1257Q9ULG3 409 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 TPRKBQ9Y3C4 175 aa14.08□□□□□ -0.16
CLCN6-201ENST00000312413 ITGA4P13612 1032 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 TAF6P49848 677 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 CSHL1Q14406 222 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 MFSD14CQ5VZR4 134 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 EID3Q8N140 333 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 MYO1HQ8N1T3 1032 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 ENKURQ8TC29 256 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 UTP15Q8TED0 518 aaKnown RBP14.07□□□□□ -0.16
CLCN6-201ENST00000312413 MRPL48Q96GC5 212 aaKnown RBP14.07□□□□□ -0.16
CLCN6-201ENST00000312413 IL25Q9H293 177 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 HMG20AQ9NP66 347 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 AVENQ9NQS1 362 aaPredicted RBP14.07□□□□□ -0.16
CLCN6-201ENST00000312413 VTI1BQ9UEU0 232 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 ABT1Q9ULW3 272 aaKnown RBP14.07□□□□□ -0.16
CLCN6-201ENST00000312413 INPP4BO15327 924 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 PARNO95453 639 aaKnown RBP14.07□□□□□ -0.16
CLCN6-201ENST00000312413 ELF3P78545 371 aaPredicted RBP14.07□□□□□ -0.16
CLCN6-201ENST00000312413 ITGA9Q13797 1035 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms