RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 F8VZ95 297 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 FAM58BPP0C7Q3 252 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 KCNJ1P48048 391 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 C21orf59P57076 290 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 FUT11Q495W5 492 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 FAM180AQ6UWF9 173 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 MTDHQ86UE4 582 aaKnown RBP8.46□□□□□ -1.06
VPS41-202ENST00000310301 TTC30BQ8N4P2 665 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 CPA5Q8WXQ8 436 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 FAM111AQ96PZ2 611 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 FOXP3Q9BZS1 431 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 TBKBP1A7MCY6 615 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 BCL10O95999 233 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 ATP2C1P98194 919 aaPredicted RBP8.46□□□□□ -1.06
VPS41-202ENST00000310301 DPYDQ12882 1025 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 MTM1Q13496 603 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 ITGA7Q13683 1181 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 SPDYE7PQ495Y7 208 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 STKLD1Q8NE28 680 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 PXYLP1Q8TE99 480 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 UVRAGQ9P2Y5 699 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 STAP1Q9ULZ2 295 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 SPATA2Q9UM82 520 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 L1RE1Q9UN81 338 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 C4BP0C0L5 1744 aa8.46□□□□□ -1.06
VPS41-202ENST00000310301 PTPN4P29074 926 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 PCSK1P29120 753 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 PNPLA4P41247 253 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 IL12RB1P42701 662 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 MAPK11Q15759 364 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 SH3D19Q5HYK7 790 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 SIX5Q8N196 739 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 TMEM79Q9BSE2 394 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 DCUN1D5Q9BTE7 237 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 STK33Q9BYT3 514 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 REXO4Q9GZR2 422 aaKnown RBP8.45□□□□□ -1.06
VPS41-202ENST00000310301 RXFP1Q9HBX9 757 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 ATAD3AQ9NVI7 634 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 TFE3P19532 575 aaPredicted RBP8.45□□□□□ -1.06
VPS41-202ENST00000310301 KLRC1P26715 233 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 COILP38432 576 aaPredicted RBP8.45□□□□□ -1.06
VPS41-202ENST00000310301 DUSP28Q4G0W2 176 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 ZNF697Q5TEC3 545 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 MROH9Q5TGP6 573 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 FGD2Q7Z6J4 655 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 ARL10Q8N8L6 244 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 HES6Q96HZ4 224 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 FAM210AQ96ND0 272 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 ALDH8A1Q9H2A2 487 aaPredicted RBP8.45□□□□□ -1.06
VPS41-202ENST00000310301 PABPC3Q9H361 631 aaKnown RBP8.45□□□□□ -1.06
VPS41-202ENST00000310301 PTCH2Q9Y6C5 1203 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 NPHP3-ACAD11A0A0J9YXS1 232 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 KRT87PA6NCN2 255 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 SMAPO00193 183 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 TAF4O00268 1085 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 FKBP6O75344 327 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 RALBP11234 206 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 CDC25CP30307 473 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 CSTF3Q12996 717 aaKnown RBP8.45□□□□□ -1.06
VPS41-202ENST00000310301 SGSM1Q2NKQ1 1148 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 TRAPPC11Q7Z392 1133 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 ADSSL1Q8N142 457 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 C19orf18Q8NEA5 215 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 TSPAN17Q96FV3 270 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 ADGRA2Q96PE1 1338 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 ARHGEF38Q9NXL2 777 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 PRG3Q9Y2Y8 225 aaPredicted RBP8.45□□□□□ -1.06
VPS41-202ENST00000310301 IPPQ9Y573 584 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 SPAG6O75602 509 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 IL18RAPO95256 599 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 PFKMP08237 780 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 COMTP21964 271 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 CTNNB1P35222 781 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 TMEM62Q0P6H9 643 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 PCBP1Q15365 356 aaKnown RBP eCLIP8.45□□□□□ -1.06
VPS41-202ENST00000310301 SPATA2LQ8IUW3 424 aaPredicted RBP8.45□□□□□ -1.06
VPS41-202ENST00000310301 IGDCC4Q8TDY8 1250 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 PTPRN2Q92932 1015 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 ZNF558Q96NG5 402 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 RERGLQ9H628 205 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 IMPAD1Q9NX62 359 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 CYP39A1Q9NYL5 469 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 TAGLN3Q9UI15 199 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 SAC3D1A6NKF1 404 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 CFAP99D6REC4 459 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 GUCA1CO95843 209 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 THRAP10827 490 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 SPRP35270 261 aaPredicted RBP8.45□□□□□ -1.06
VPS41-202ENST00000310301 PSMC6P62333 389 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 BEX3Q00994 111 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 PGM5Q15124 567 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 Q4G0T1 1027 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 PAN2Q504Q3 1202 aaKnown RBP8.45□□□□□ -1.06
VPS41-202ENST00000310301 EFHC1Q5JVL4 640 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 WASHC2DQ5SRD0 308 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 ARMC4Q5T2S8 1044 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 SNX30Q5VWJ9 437 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 PKN3Q6P5Z2 889 aa8.45□□□□□ -1.06
VPS41-202ENST00000310301 BNC2Q6ZN30 1099 aaPredicted RBP8.45□□□□□ -1.06
VPS41-202ENST00000310301 TSHZ1Q6ZSZ6 1077 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms