RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 CPT1BQ92523 772 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 MOV10L1Q9BXT6 1211 aaKnown RBP15.15■□□□□ 0.02
PTPN9-201ENST00000306726 RNPEPQ9H4A4 650 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 STARD13Q9Y3M8 1113 aa15.15■□□□□ 0.02
PTPN9-201ENST00000306726 CXorf49A8MYA2 514 aaPredicted RBP15.14■□□□□ 0.01
PTPN9-201ENST00000306726 ADCY3O60266 1144 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 ENO3P13929 434 aaPredicted RBP15.14■□□□□ 0.01
PTPN9-201ENST00000306726 RBL1P28749 1068 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 MRPS35P82673 323 aaKnown RBP15.14■□□□□ 0.01
PTPN9-201ENST00000306726 MMEL1Q495T6 779 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 MCUQ8NE86 351 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 LRMDAQ9H2I8 198 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 SEC24DO94855 1032 aaPredicted RBP15.14■□□□□ 0.01
PTPN9-201ENST00000306726 ATP6V1C1P21283 382 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 ARL1P40616 181 aaPredicted RBP15.14■□□□□ 0.01
PTPN9-201ENST00000306726 PKNOX1P55347 436 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 PDE1CQ14123 709 aaPredicted RBP15.14■□□□□ 0.01
PTPN9-201ENST00000306726 SPATA6LQ8N4H0 392 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 PHC3Q8NDX5 983 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 FAM136AQ96C01 138 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 CNBD2Q96M20 576 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 ZNF358Q9NW07 568 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 PTPRFP10586 1907 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 TP73O15350 636 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 SNUPNO95149 360 aaKnown RBP15.14■□□□□ 0.01
PTPN9-201ENST00000306726 ALDH1A1P00352 501 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 TNNC2P02585 160 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 ADORA2BP29275 332 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 SLC34A1Q06495 639 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 STX3Q13277 289 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 CCNYL1Q8N7R7 359 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 ZSCAN18Q8TBC5 510 aaPredicted RBP15.14■□□□□ 0.01
PTPN9-201ENST00000306726 PRPF31Q8WWY3 499 aaKnown RBP15.14■□□□□ 0.01
PTPN9-201ENST00000306726 DDX1Q92499 740 aaKnown RBP15.14■□□□□ 0.01
PTPN9-201ENST00000306726 C17orf75Q9HAS0 396 aa15.14■□□□□ 0.01
PTPN9-201ENST00000306726 ABT1Q9ULW3 272 aaKnown RBP15.14■□□□□ 0.01
PTPN9-201ENST00000306726 PRRC2BQ5JSZ5 2229 aaKnown RBP15.13■□□□□ 0.01
PTPN9-201ENST00000306726 CCL15-CCL14A0A0B4J2E2 113 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 SLC25A27O95847 323 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 LCP1P13796 627 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 MIPP30301 263 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 GPC3P51654 580 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 ATXN1P54253 815 aaKnown RBP15.13■□□□□ 0.01
PTPN9-201ENST00000306726 CCNA1P78396 465 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 CCL15Q16663 113 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 KLHL38Q2WGJ6 581 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 MOB2Q70IA6 237 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 SCUBE3Q8IX30 993 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 ZC3H3Q8IXZ2 948 aaKnown RBP15.13■□□□□ 0.01
PTPN9-201ENST00000306726 FNDC3AQ9Y2H6 1198 aaKnown RBP15.13■□□□□ 0.01
PTPN9-201ENST00000306726 B4GALT5O43286 388 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 DCXO43602 365 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 ZWINTO95229 277 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 CXCL8P10145 99 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 APLP1P51693 650 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 CLCN3P51790 818 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 ZNF667Q5HYK9 610 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 PPM1JQ5JR12 505 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 ZNF354CQ86Y25 554 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 SH3TC2Q8TF17 1288 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 ZNF302Q9NR11 478 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 CORO1CQ9ULV4 474 aaPredicted RBP15.13■□□□□ 0.01
PTPN9-201ENST00000306726 APOBEC2Q9Y235 224 aaKnown RBP15.13■□□□□ 0.01
PTPN9-201ENST00000306726 A0A0B4J269 797 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 XPO1O14980 1071 aaKnown RBP15.13■□□□□ 0.01
PTPN9-201ENST00000306726 UNGP13051 313 aaPredicted RBP15.13■□□□□ 0.01
PTPN9-201ENST00000306726 POLR2BP30876 1174 aaKnown RBP15.13■□□□□ 0.01
PTPN9-201ENST00000306726 GNL1P36915 607 aaPredicted RBP15.13■□□□□ 0.01
PTPN9-201ENST00000306726 AVPR1AP37288 418 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 MAPK10P53779 464 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 AP1B1Q10567 949 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 RHBDF2Q6PJF5 856 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 ALLCQ8N6M5 410 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 CHST13Q8NET6 341 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 MBOAT7Q96N66 472 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 TEX13BQ9BXU2 312 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 PPM1HQ9ULR3 514 aa15.13■□□□□ 0.01
PTPN9-201ENST00000306726 CLUHO75153 1309 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 A6NJR5 290 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 ITGB3P05106 788 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 TYK2P29597 1187 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 RABGGTBP53611 331 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 KRT76Q01546 638 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 HIC1Q14526 733 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 TREML1Q86YW5 311 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 MAP4K3Q8IVH8 894 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 DEFB107AQ8IZN7 70 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 NRG4Q8WWG1 115 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 NDRG1Q92597 394 aaKnown RBP15.12■□□□□ 0.01
PTPN9-201ENST00000306726 EXT2Q93063 718 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 TMA16Q96EY4 203 aaKnown RBP15.12■□□□□ 0.01
PTPN9-201ENST00000306726 VWA5AO00534 786 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 EXTL3O43909 919 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 TPST1O60507 370 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 FGFR3P22607 806 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 GEN1Q17RS7 908 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 GJC2Q5T442 439 aaPredicted RBP15.12■□□□□ 0.01
PTPN9-201ENST00000306726 LGSNQ5TDP6 509 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 CEP128Q6ZU80 1094 aa15.12■□□□□ 0.01
PTPN9-201ENST00000306726 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms