RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 AARS2Q5JTZ9 985 aaKnown RBP11.36□□□□□ -0.59
PBRM1-201ENST00000296302 KYAT3Q6YP21 454 aaKnown RBP11.36□□□□□ -0.59
PBRM1-201ENST00000296302 DNAAF5Q86Y56 855 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 ETNPPLQ8TBG4 499 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 MAGEC3Q8TD91 643 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 FOPNLQ96NB1 174 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 DCUN1D5Q9BTE7 237 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 DMAP1Q9NPF5 467 aaPredicted RBP11.36□□□□□ -0.59
PBRM1-201ENST00000296302 FARP1Q9Y4F1 1045 aaPredicted RBP11.36□□□□□ -0.59
PBRM1-201ENST00000296302 MAGEB16A2A368 324 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 PDZK1P1A8MUH7 402 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 CYTH3O43739 400 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 ATP6V1B2P21281 511 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 PCSK1P29120 753 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 AVPR1AP37288 418 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 GLRBP48167 497 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 APOBEC3FQ8IUX4 373 aaKnown RBP11.36□□□□□ -0.59
PBRM1-201ENST00000296302 SNX31Q8N9S9 440 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 KIAA1683Q9H0B3 1180 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 CHST12Q9NRB3 414 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 MCM8Q9UJA3 840 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 RAD54BQ9Y620 910 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 MEI4A8MW99 385 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 CNOT3O75175 753 aaKnown RBP11.36□□□□□ -0.59
PBRM1-201ENST00000296302 SMNDC1O75940 238 aaKnown RBP eCLIP11.36□□□□□ -0.59
PBRM1-201ENST00000296302 CHRM3P20309 590 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 SSTR1P30872 391 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 GNL1P36915 607 aaPredicted RBP11.36□□□□□ -0.59
PBRM1-201ENST00000296302 PNPLA4P41247 253 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 NPTX2P47972 431 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 ATP6AP1LQ52LC2 224 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 SVOPQ8N4V2 548 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 PNMA5Q96PV4 448 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 C9orf16Q9BUW7 83 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 AK9Q5TCS8 1911 aa11.36□□□□□ -0.59
PBRM1-201ENST00000296302 SNTNA6NMZ2 147 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 TRDMT1O14717 391 aaKnown RBP11.35□□□□□ -0.59
PBRM1-201ENST00000296302 NCKAP1LP55160 1127 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 NAB1Q13506 487 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 DALRD3Q5D0E6 543 aaKnown RBP11.35□□□□□ -0.59
PBRM1-201ENST00000296302 GRTP1Q5TC63 336 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 FAM172AQ8WUF8 416 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 DIABLOQ9NR28 239 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 TRMT6Q9UJA5 497 aaKnown RBP11.35□□□□□ -0.59
PBRM1-201ENST00000296302 SESN1Q9Y6P5 492 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 CPS1P31327 1500 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 KBTBD13C9JR72 458 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 MAP3K13O43283 966 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 ITGB3P05106 788 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 ABHD2P08910 425 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 EARS2Q5JPH6 523 aaKnown RBP11.35□□□□□ -0.59
PBRM1-201ENST00000296302 TTC27Q6P3X3 843 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 TSHZ1Q6ZSZ6 1077 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 SV2AQ7L0J3 742 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 RAB42Q8N4Z0 105 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 TADA1Q96BN2 335 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 KCTD14Q9BQ13 255 aaPredicted RBP11.35□□□□□ -0.59
PBRM1-201ENST00000296302 GANQ9H2C0 597 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 RIOX1Q9H6W3 641 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 COMMD8Q9NX08 183 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 RNF112Q9ULX5 631 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 NRXN1Q9ULB1 1477 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 CFAP99D6REC4 459 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 OPLAHO14841 1288 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 PMPCBO75439 489 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 LDLRP01130 860 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 CPB1P15086 417 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 RPL5P46777 297 aaKnown RBP11.35□□□□□ -0.59
PBRM1-201ENST00000296302 GCNT1Q02742 428 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 CACNB2Q08289 660 aaPredicted RBP11.35□□□□□ -0.59
PBRM1-201ENST00000296302 RIPK1Q13546 671 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 MTMR2Q13614 643 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 MAPRE1Q15691 268 aaKnown RBP11.35□□□□□ -0.59
PBRM1-201ENST00000296302 FAM98BQ52LJ0 330 aaKnown RBP11.35□□□□□ -0.59
PBRM1-201ENST00000296302 WDR59Q6PJI9 974 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 POU5F2Q8N7G0 328 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 SLC38A7Q9NVC3 462 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 ARIH2O95376 493 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 MED26O95402 600 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 NCAM1P13591 858 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 CDC25CP30307 473 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 NAMPTP43490 491 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 BLVRAP53004 296 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 PARP6Q2NL67 630 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 SYTL3Q4VX76 610 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 SGO1Q5FBB7 561 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 SAMD4BQ5PRF9 694 aaKnown RBP11.35□□□□□ -0.59
PBRM1-201ENST00000296302 FAM182BQ5T319 152 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 SPATA17Q96L03 361 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 HMG20AQ9NP66 347 aa11.35□□□□□ -0.59
PBRM1-201ENST00000296302 A0A0U1RQJ8 604 aa11.34□□□□□ -0.59
PBRM1-201ENST00000296302 M0QYT0 321 aa11.34□□□□□ -0.59
PBRM1-201ENST00000296302 ZNF862O60290 1169 aa11.34□□□□□ -0.59
PBRM1-201ENST00000296302 DDHD2O94830 711 aa11.34□□□□□ -0.59
PBRM1-201ENST00000296302 PROCP04070 461 aa11.34□□□□□ -0.59
PBRM1-201ENST00000296302 SHBGP04278 402 aa11.34□□□□□ -0.59
PBRM1-201ENST00000296302 AKT1P31749 480 aa11.34□□□□□ -0.59
PBRM1-201ENST00000296302 KRT20P35900 424 aa11.34□□□□□ -0.59
PBRM1-201ENST00000296302 ILF2Q12905 390 aaKnown RBP11.34□□□□□ -0.59
PBRM1-201ENST00000296302 PDK4Q16654 411 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms