RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 LINC00597Q9H2U6 94 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 CCSER2Q9H7U1 834 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 PLCB1Q9NQ66 1216 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 ARHGEF3Q9NR81 526 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 HEBP1Q9NRV9 189 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 GKN1Q9NS71 199 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.66□□□□□ -0.86
HMGN1-201ENST00000288344 CLIC5Q9NZA1 410 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 GMIPQ9P107 970 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 CYTH4Q9UIA0 394 aa9.66□□□□□ -0.86
HMGN1-201ENST00000288344 PIEZO1Q92508 2521 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 KANSL1LA0AUZ9 987 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 ZNF263O14978 683 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 EPHB6O15197 1021 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 TBX18O95935 607 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 FYNP06241 537 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 USP17L7P0C7H9 530 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 TARSP26639 723 aaKnown RBP9.65□□□□□ -0.86
HMGN1-201ENST00000288344 ANXA13P27216 316 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 YWHAEP62258 255 aaKnown RBP9.65□□□□□ -0.86
HMGN1-201ENST00000288344 EIF4EBP2Q13542 120 aaPredicted RBP9.65□□□□□ -0.86
HMGN1-201ENST00000288344 GAS6Q14393 721 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 NR6A1Q15406 480 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 STX1AQ16623 288 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 EML3Q32P44 896 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 ARHGAP29Q52LW3 1261 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 SGO2Q562F6 1265 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 DESI1Q6ICB0 168 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 SASS6Q6UVJ0 657 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 LYPD8Q6UX82 237 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 FAM114A1Q8IWE2 563 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 SCUBE3Q8IX30 993 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 CCDC105Q8IYK2 499 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 RBBP8NLQ8NC74 664 aaPredicted RBP9.65□□□□□ -0.86
HMGN1-201ENST00000288344 PDZD8Q8NEN9 1154 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 PRSS33Q8NF86 280 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 UBA3Q8TBC4 463 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 SH3RF2Q8TEC5 729 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 STK32AQ8WU08 396 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 OSCP1Q8WVF1 389 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 DDX1Q92499 740 aaKnown RBP9.65□□□□□ -0.86
HMGN1-201ENST00000288344 GLMNQ92990 594 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 FBXO32Q969P5 355 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 CCDC97Q96F63 343 aaPredicted RBP9.65□□□□□ -0.86
HMGN1-201ENST00000288344 SLITRK1Q96PX8 696 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 MED10Q9BTT4 135 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 GANQ9H2C0 597 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 FBXO44Q9H4M3 255 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 BRD9Q9H8M2 597 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 TBC1D17Q9HA65 648 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 KIF9Q9HAQ2 790 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 FBRSL1Q9HCM7 1045 aaKnown RBP9.65□□□□□ -0.86
HMGN1-201ENST00000288344 LTB4R2Q9NPC1 389 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 GTSE1Q9NYZ3 720 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 CA14Q9ULX7 337 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 PCDHB4Q9Y5E5 795 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 ATP8B3O60423 1300 aa9.65□□□□□ -0.86
HMGN1-201ENST00000288344 CFAP54Q96N23 3096 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 A0A0A0MRY4 1105 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 TRAV19A0A0A6YYK7 116 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 A0A1W2PQH9 124 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 LEFTY2O00292 366 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 GFRA2O00451 464 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 CYP26A1O43174 497 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 CHRNB1P11230 501 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 ATP1A3P13637 1013 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 UCHL3P15374 230 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 CD72P21854 359 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 BRD2P25440 801 aaKnown RBP9.64□□□□□ -0.87
HMGN1-201ENST00000288344 AVPR1AP37288 418 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 MTIF2P46199 727 aaKnown RBP9.64□□□□□ -0.87
HMGN1-201ENST00000288344 KLK7P49862 253 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 JAM2P57087 298 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 MYL5Q02045 173 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 BST2Q10589 180 aaKnown RBP9.64□□□□□ -0.87
HMGN1-201ENST00000288344 TAF12Q16514 161 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 HECTD3Q5T447 861 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 CAVIN1Q6NZI2 390 aaKnown RBP9.64□□□□□ -0.87
HMGN1-201ENST00000288344 HTR3DQ70Z44 454 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 TMEM110Q86TL2 294 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 PJA1Q8NG27 643 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 OLIG1Q8TAK6 271 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 NDRG1Q92597 394 aaKnown RBP9.64□□□□□ -0.87
HMGN1-201ENST00000288344 EZH1Q92800 747 aaPredicted RBP9.64□□□□□ -0.87
HMGN1-201ENST00000288344 NELL1Q92832 810 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 HSFY1Q96LI6 401 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 FAM81BQ96LP2 452 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 ERGIC2Q96RQ1 377 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 NELL2Q99435 816 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 FOXQ1Q9C009 403 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 SLITRK6Q9H5Y7 841 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 DNAJC12Q9UKB3 198 aa9.64□□□□□ -0.87
HMGN1-201ENST00000288344 FANCMQ8IYD8 2048 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 TRDMT1O14717 391 aaKnown RBP9.63□□□□□ -0.87
HMGN1-201ENST00000288344 TLR5O60602 858 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 KLKB1P03952 638 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 SETSIPP0DME0 302 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 TDGF1P13385 188 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 ARSAP15289 507 aa9.63□□□□□ -0.87
HMGN1-201ENST00000288344 CTHP32929 405 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms