RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 CROTQ9UKG9 612 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 CDC42EP3Q9UKI2 254 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 PCDHA10Q9Y5I2 948 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 ADAM11O75078 769 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 METTL18O95568 372 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TK1P04183 234 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TOP1P11387 765 aaKnown RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 NPR1P16066 1061 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 MAP4P27816 1152 aaKnown RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 IFNAR2P48551 515 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 NBPF8Q3BBV2 869 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 MGAT5BQ3V5L5 792 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 CHST3Q7LGC8 479 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 FAM181AQ8N9Y4 354 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 ZKSCAN4Q969J2 545 aaPredicted RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 COLEC11Q9BWP8 271 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TRIM54Q9BYV2 358 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 ACSS3Q9H6R3 686 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 PPANQ9NQ55 473 aaKnown RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 PCDHB16Q9NRJ7 776 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 LIN7CQ9NUP9 197 aaKnown RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 BTBD7Q9P203 1132 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 APPL1Q9UKG1 709 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 SENP3-EIF4A1A0A087X0R7 540 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 AQP7P3A6NL99 342 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 H0YAE9 185 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 GLP2RO95838 553 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 AMY2AP04746 511 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 PRKCBP05771 671 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 AMY2BP19961 511 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 MYO1EQ12965 1108 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 PRR23CQ6ZRP0 262 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 NEK10Q6ZWH5 1172 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TSPYL5Q86VY4 417 aaPredicted RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 FSIP1Q8NA03 581 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 SAMD11Q96NU1 681 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 PRAM1Q96QH2 718 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 ORAI2Q96SN7 254 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 DUSP23Q9BVJ7 150 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 SLC25A32Q9H2D1 315 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 SEMA6CQ9H3T2 930 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 RMI1Q9H9A7 625 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 BRF2Q9HAW0 419 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 NOP53Q9NZM5 478 aaKnown RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 TBK1Q9UHD2 729 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 GJD2Q9UKL4 321 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 CA14Q9ULX7 337 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 SHOC2Q9UQ13 582 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 HDAC5Q9UQL6 1122 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 ABCC11Q96J66 1382 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 PLEKHG1Q9ULL1 1385 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 PTPRUQ92729 1446 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 ADAMTS7Q9UKP4 1686 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TEX13CA0A0J9YWL9 993 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 SLC35F4A4IF30 521 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 A6NL46 340 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 C16orf96A6NNT2 1141 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 ZNF561-AS1K7EIQ3 104 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 SNAP23O00161 211 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 SYN3O14994 580 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TEX33O43247 280 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 STRNO43815 780 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 CTNNB1P35222 781 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 RTP1P59025 263 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 MGAT2Q10469 447 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 DRICH1Q6PGQ1 229 aaPredicted RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 FAM111BQ6SJ93 734 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 UNQ6494/PRO21346Q6UXR6 183 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 DPP8Q6V1X1 898 aaPredicted RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 USP49Q70CQ1 688 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 HOOK3Q86VS8 718 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TSPEARQ8WU66 669 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 PIP5K1AQ99755 562 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 IMPG2Q9BZV3 1241 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 REXO4Q9GZR2 422 aaKnown RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 CLPBQ9H078 707 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 SLC39A2Q9NP94 309 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 MID2Q9UJV3 735 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 CHKBQ9Y259 395 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 NPFFR2Q9Y5X5 522 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 PIAS3Q9Y6X2 628 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 CDK12Q9NYV4 1490 aaPredicted RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 LMO7Q8WWI1 1683 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TMEM265A0A087WTH1 108 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 ADARB2-AS1A8MUL3 147 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 H3BM21 787 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 ZBTB43O43298 467 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 ITGB1P05556 798 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TTKP33981 857 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 NTF4P34130 210 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 KCNAB1Q14722 419 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 PPA1Q15181 289 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 DPCR1Q3MIW9 517 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 TOM1L2Q6ZVM7 507 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 CHST9Q7L1S5 443 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 UBE3BQ7Z3V4 1068 aa2.92□□□□□ -1.94
CHD1-201ENST00000284049 CNOT9Q92600 299 aaKnown RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 RNF166Q96A37 237 aaPredicted RBP2.92□□□□□ -1.94
CHD1-201ENST00000284049 MSLNLQ96KJ4 702 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms