RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 DENND5BQ6ZUT9 1274 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 SCD5Q86SK9 330 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 CTAGE6Q86UF2 777 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 CTAGE4Q8IX94 777 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 SPPL3Q8TCT6 385 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 SLC2A13Q96QE2 648 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 HEMGNQ9BXL5 484 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 FAM204AQ9H8W3 233 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 NMUR1Q9HB89 426 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.89□□□□□ -0.51
XRCC4-201ENST00000282268 CALCOCO1Q9P1Z2 691 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 USP3Q9Y6I4 520 aa11.89□□□□□ -0.51
XRCC4-201ENST00000282268 LRRD1A4D1F6 860 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 PGRMC1O00264 195 aaKnown RBP11.88□□□□□ -0.51
XRCC4-201ENST00000282268 LPXNO60711 386 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 LILRB3O75022 631 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 CAPN15O75808 1086 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 ABLIM3O94929 683 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 GLI1P08151 1106 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 ATF2P15336 505 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 ALDH1A3P47895 512 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 HDAC4P56524 1084 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 DEUP1Q05D60 604 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 TWF1Q12792 350 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 TAF10Q12962 218 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 SLC25A52Q3SY17 297 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 TPGS2Q68CL5 300 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 FAM131BQ86XD5 332 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 KCTD6Q8NC69 237 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 IRGQQ8WZA9 623 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 RAPGEF5Q92565 580 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 KLHL5Q96PQ7 755 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 TGS1Q96RS0 853 aaKnown RBP11.88□□□□□ -0.51
XRCC4-201ENST00000282268 FBXO44Q9H4M3 255 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 STAP1Q9ULZ2 295 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 SSX2IPQ9Y2D8 614 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 RWDD3Q9Y3V2 267 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 YIPF1Q9Y548 306 aa11.88□□□□□ -0.51
XRCC4-201ENST00000282268 KRIT1O00522 736 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 TGM5O43548 720 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 RTN3O95197 1032 aaPredicted RBP11.87□□□□□ -0.51
XRCC4-201ENST00000282268 ZRANB2O95218 330 aaKnown RBP eCLIP11.87□□□□□ -0.51
XRCC4-201ENST00000282268 RARAP10276 462 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 IRS1P35568 1242 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 PTPN9P43378 593 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 MRPS25P82663 173 aaKnown RBP11.87□□□□□ -0.51
XRCC4-201ENST00000282268 CREMQ03060 361 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 PLD1Q13393 1074 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 GPM6BQ13491 265 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 ACAP1Q15027 740 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 KCTD19Q17RG1 926 aaPredicted RBP11.87□□□□□ -0.51
XRCC4-201ENST00000282268 ZC3H12AQ5D1E8 599 aaKnown RBP11.87□□□□□ -0.51
XRCC4-201ENST00000282268 RSRC2Q7L4I2 434 aaKnown RBP11.87□□□□□ -0.51
XRCC4-201ENST00000282268 ANKS1BQ7Z6G8 1248 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 KATNAL2Q8IYT4 538 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 CCDC185Q8N715 623 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 RNF139Q8WU17 664 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 ARNTL2Q8WYA1 636 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 TSC1Q92574 1164 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 RNF34Q969K3 372 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 SPATA17Q96L03 361 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 C11orf84Q9BUA3 381 aaPredicted RBP11.87□□□□□ -0.51
XRCC4-201ENST00000282268 PLVAPQ9BX97 442 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 EMILIN2Q9BXX0 1053 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 CARD9Q9H257 536 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 RXFP1Q9HBX9 757 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 TLR9Q9NR96 1032 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 TMPRSS4Q9NRS4 437 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.87□□□□□ -0.51
XRCC4-201ENST00000282268 DDIT4Q9NX09 232 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 OSER1Q9NX31 292 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 DDX56Q9NY93 547 aaKnown RBP11.87□□□□□ -0.51
XRCC4-201ENST00000282268 FNIP2Q9P278 1114 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 STK39Q9UEW8 545 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 SFMBT1Q9UHJ3 866 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 SCML2Q9UQR0 700 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 PCDHA11Q9Y5I1 949 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 UQCRHLA0A096LP55 91 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 TCRBV7S2A1N4TA0A589 114 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 C2orf71A6NGG8 1288 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 CES2O00748 559 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 UQCRHP07919 91 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 KRT7P08729 469 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 CD48P09326 243 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 RALAP11233 206 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 KRT10P13645 584 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 RDXP35241 583 aaKnown RBP11.87□□□□□ -0.51
XRCC4-201ENST00000282268 PCK1P35558 622 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 KRT81Q14533 505 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 OTUD1Q5VV17 481 aaPredicted RBP11.87□□□□□ -0.51
XRCC4-201ENST00000282268 MFSD7Q6UXD7 560 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 TAC4Q86UU9 113 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 KLHL7Q8IXQ5 586 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 RASGEF1CQ8N431 466 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 MYRIPQ8NFW9 859 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 ACTRT1Q8TDG2 376 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 NPY6RQ99463 290 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 GDF15Q99988 308 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 PBX4Q9BYU1 374 aa11.87□□□□□ -0.51
XRCC4-201ENST00000282268 MAGEB5Q9BZ81 275 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms