RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 PIGZQ86VD9 579 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 TTC30AQ86WT1 665 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 TRIM59Q8IWR1 403 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 GPR161Q8N6U8 529 aaKnown RBP16.92■□□□□ 0.3
USE1-201ENST00000263897 USP33Q8TEY7 942 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 ACDQ96AP0 544 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 NT5C1BQ96P26 610 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 SPHK2Q9NRA0 654 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 DNMT3LQ9UJW3 386 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 NUDT5Q9UKK9 219 aa16.92■□□□□ 0.3
USE1-201ENST00000263897 MYO18AQ92614 2054 aaKnown RBP16.92■□□□□ 0.3
USE1-201ENST00000263897 RALAP11233 206 aa16.91■□□□□ 0.3
USE1-201ENST00000263897 VDRP11473 427 aa16.91■□□□□ 0.3
USE1-201ENST00000263897 MESP2Q0VG99 397 aa16.91■□□□□ 0.3
USE1-201ENST00000263897 KCNH2Q12809 1159 aa16.91■□□□□ 0.3
USE1-201ENST00000263897 DMC1Q14565 340 aa16.91■□□□□ 0.3
USE1-201ENST00000263897 LPAL2Q16609 132 aa16.91■□□□□ 0.3
USE1-201ENST00000263897 C2orf27AQ580R0 203 aa16.91■□□□□ 0.3
USE1-201ENST00000263897 PRR23BQ6ZRT6 265 aa16.91■□□□□ 0.3
USE1-201ENST00000263897 TADA2BQ86TJ2 420 aa16.91■□□□□ 0.3
USE1-201ENST00000263897 C12orf40Q86WS4 652 aa16.91■□□□□ 0.3
USE1-201ENST00000263897 TMEM25Q86YD3 366 aa16.91■□□□□ 0.3
USE1-201ENST00000263897 EHBP1Q8NDI1 1231 aa16.91■□□□□ 0.3
USE1-201ENST00000263897 TSPAN16Q9UKR8 245 aa16.91■□□□□ 0.3
USE1-201ENST00000263897 ANTXRLA6NF34 631 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 MDM4O15151 490 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 HOXC11O43248 304 aaPredicted RBP16.9■□□□□ 0.3
USE1-201ENST00000263897 KAT7O95251 611 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 FGFR1OPO95684 399 aaKnown RBP16.9■□□□□ 0.3
USE1-201ENST00000263897 APODP05090 189 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 PAEPP09466 180 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 CD19P15391 556 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 GRIA2P42262 883 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 TKTL1P51854 596 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 MRPS21P82921 87 aaKnown RBP16.9■□□□□ 0.3
USE1-201ENST00000263897 PDE4CQ08493 712 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 GOLGA8FQ08AF8 430 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 GOLGA8DPQ0D2H9 430 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 GOLGA7BQ2TAP0 167 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 BTBD8Q5XKL5 378 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 PM20D1Q6GTS8 502 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 TMEM270Q6UE05 265 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 ARHGAP18Q8N392 663 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 PPM1KQ8N3J5 372 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 CDK5RAP1Q96SZ6 601 aaKnown RBP16.9■□□□□ 0.3
USE1-201ENST00000263897 HESX1Q9UBX0 185 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 LSM7Q9UK45 103 aaKnown RBP16.9■□□□□ 0.3
USE1-201ENST00000263897 GMEB2Q9UKD1 530 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.9■□□□□ 0.3
USE1-201ENST00000263897 SPAG17Q6Q759 2223 aa16.9■□□□□ 0.3
USE1-201ENST00000263897 KIAA1549LQ6ZVL6 1849 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.89■□□□□ 0.29
USE1-201ENST00000263897 RNF225M0QZC1 329 aaPredicted RBP16.89■□□□□ 0.29
USE1-201ENST00000263897 TULP2O00295 520 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 O00370 1275 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 XPO1O14980 1071 aaKnown RBP16.89■□□□□ 0.29
USE1-201ENST00000263897 ZBED1O96006 694 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 RETP07949 1114 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 CCDC192P0DO97 292 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 TGM1P22735 817 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 TNFRSF4P43489 277 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 ID4P47928 161 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 BCAT1P54687 386 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 SEC13P55735 322 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 BST2Q10589 180 aaKnown RBP16.89■□□□□ 0.29
USE1-201ENST00000263897 ANO4Q32M45 955 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 CEP68Q76N32 757 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 SFTPA1Q8IWL2 248 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 ETFBKMTQ8IXQ9 262 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 PHTF2Q8N3S3 785 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 NAT16Q8N8M0 369 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 UBA3Q8TBC4 463 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 GAB3Q8WWW8 586 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 TFAP2BQ92481 460 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 KAT5Q92993 513 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 HHIPQ96QV1 700 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 ARHGEF4Q9NR80 690 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 EBF1Q9UH73 591 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 RWDD2AQ9UIY3 292 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 PCDHB4Q9Y5E5 795 aa16.89■□□□□ 0.29
USE1-201ENST00000263897 FRYLO94915 3013 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 RALGAPA1Q6GYQ0 2036 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 AXIN1O15169 862 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 TULP3O75386 442 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 RPP40O75818 363 aaKnown RBP16.88■□□□□ 0.29
USE1-201ENST00000263897 STC2O76061 302 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 APBB3O95704 486 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 AFPP02771 609 aaKnown RBP16.88■□□□□ 0.29
USE1-201ENST00000263897 YWHAGP61981 247 aaKnown RBP eCLIP16.88■□□□□ 0.29
USE1-201ENST00000263897 COG7P83436 770 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 CNGA2Q16280 664 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 PKDCCQ504Y2 493 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 EMC10Q5UCC4 262 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 LCLAT1Q6UWP7 414 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 Q6ZNB5 142 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 RRAGAQ7L523 313 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 MIB1Q86YT6 1006 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 CCDC33Q8N5R6 958 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 KCTD13Q8WZ19 329 aa16.88■□□□□ 0.29
USE1-201ENST00000263897 MED15Q96RN5 788 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms