RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 TMCO5AQ8N6Q1 288 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 COLGALT1Q8NBJ5 622 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 APOL2Q9BQE5 337 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 APOL5Q9BWW9 433 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 APPL1Q9UKG1 709 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 A0A087WZ62 844 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 SPDYE5A6NIY4 337 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 PRRG1O14668 218 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 TNFRSF8P28908 595 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 RAP1GAPP47736 663 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 SPDYE7PQ495Y7 208 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 NUDT18Q6ZVK8 323 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 BRSK2Q8IWQ3 736 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 MICU2Q8IYU8 434 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 USP13Q92995 863 aaPredicted RBP11.09□□□□□ -0.63
CD44-201ENST00000263398 ZNF333Q96JL9 665 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 FDXACB1Q9BRP7 624 aaPredicted RBP11.09□□□□□ -0.63
CD44-201ENST00000263398 THUMPD3Q9BV44 507 aaKnown RBP11.09□□□□□ -0.63
CD44-201ENST00000263398 ASB7Q9H672 318 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 IL1RAPL1Q9NZN1 696 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 CRLS1Q9UJA2 301 aa11.09□□□□□ -0.63
CD44-201ENST00000263398 MAGEB16A2A368 324 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 HEATR9A2RTY3 570 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 VPS26AO75436 327 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 ZCCHC18P0CG32 403 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 GP5P40197 560 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 PEX5P50542 639 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 FBXO47Q5MNV8 452 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 PKN3Q6P5Z2 889 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 ANKS3Q6ZW76 656 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 CCDC33Q8N5R6 958 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 TBC1D19Q8N5T2 526 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 ETNPPLQ8TBG4 499 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 RAET1EQ8TD07 263 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 CINPQ9BW66 212 aaPredicted RBP11.08□□□□□ -0.64
CD44-201ENST00000263398 DDX4Q9NQI0 724 aaKnown RBP11.08□□□□□ -0.64
CD44-201ENST00000263398 ITGA11Q9UKX5 1188 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 LZTS1Q9Y250 596 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 E9PBE3 544 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 KLHL41O60662 606 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 TOMM70O94826 608 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 PSMC3P17980 439 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 EIF4BP23588 611 aaKnown RBP11.08□□□□□ -0.64
CD44-201ENST00000263398 SLC11A2P49281 568 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 RUNX1T1Q06455 604 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 ACAP1Q15027 740 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 CCDC85BQ15834 202 aaPredicted RBP11.08□□□□□ -0.64
CD44-201ENST00000263398 AARS2Q5JTZ9 985 aaKnown RBP11.08□□□□□ -0.64
CD44-201ENST00000263398 MIIPQ5JXC2 388 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 C1orf186Q6ZWK4 172 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 MREGQ8N565 214 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 SNX31Q8N9S9 440 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 EPS8L1Q8TE68 723 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 CNBD2Q96M20 576 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 NR1H4Q96RI1 486 aaPredicted RBP11.08□□□□□ -0.64
CD44-201ENST00000263398 BRD8Q9H0E9 1235 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 NEUROG2Q9H2A3 272 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 TSPAN16Q9UKR8 245 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 DNPEPQ9ULA0 475 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 C17orf102A2RUQ5 167 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 SRRM3A6NNA2 597 aaPredicted RBP11.08□□□□□ -0.64
CD44-201ENST00000263398 VWA5AO00534 786 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 FCHO1O14526 889 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 SERPINE1P05121 402 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 PGK2P07205 417 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 HNRNPH3P31942 346 aaKnown RBP11.08□□□□□ -0.64
CD44-201ENST00000263398 AVPR1AP37288 418 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 SLC15A2Q16348 729 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 TDRD10Q5VZ19 366 aaKnown RBP11.08□□□□□ -0.64
CD44-201ENST00000263398 ZNF786Q8N393 782 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 STX19Q8N4C7 294 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 APOPT1Q96IL0 206 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 AP4S1Q9Y587 144 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 SNX13Q9Y5W8 968 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 V9GYQ6 96 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 BCL9O00512 1426 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 VTNP04004 478 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 NUP107P57740 925 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 ERMARDQ5T6L9 678 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 HORMAD1Q86X24 394 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 VPS50Q96JG6 964 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 SPON1Q9HCB6 807 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 SYTL2Q9HCH5 934 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 KCNMB3Q9NPA1 279 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 CHST7Q9NS84 486 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 WWOXQ9NZC7 414 aa11.08□□□□□ -0.64
CD44-201ENST00000263398 KBTBD13C9JR72 458 aa11.07□□□□□ -0.64
CD44-201ENST00000263398 PAEPP09466 180 aa11.07□□□□□ -0.64
CD44-201ENST00000263398 LHX1P48742 406 aa11.07□□□□□ -0.64
CD44-201ENST00000263398 MRPS15P82914 257 aaKnown RBP11.07□□□□□ -0.64
CD44-201ENST00000263398 CHRNB3Q05901 458 aa11.07□□□□□ -0.64
CD44-201ENST00000263398 PKN2Q16513 984 aaKnown RBP11.07□□□□□ -0.64
CD44-201ENST00000263398 PDPK2PQ6A1A2 396 aa11.07□□□□□ -0.64
CD44-201ENST00000263398 ZDHHC17Q8IUH5 632 aa11.07□□□□□ -0.64
CD44-201ENST00000263398 FBXO16Q8IX29 292 aaPredicted RBP11.07□□□□□ -0.64
CD44-201ENST00000263398 KATNAL2Q8IYT4 538 aa11.07□□□□□ -0.64
CD44-201ENST00000263398 TTC30BQ8N4P2 665 aa11.07□□□□□ -0.64
CD44-201ENST00000263398 ZCCHC9Q8N567 271 aaKnown RBP11.07□□□□□ -0.64
CD44-201ENST00000263398 DNAJC19Q96DA6 116 aa11.07□□□□□ -0.64
CD44-201ENST00000263398 TCF7L2Q9NQB0 619 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms