RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 ASB12Q8WXK4 309 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 RBM17Q96I25 401 aaKnown RBP11.4□□□□□ -0.58
USP31-201ENST00000219689 MNTQ99583 582 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 FUCA2Q9BTY2 467 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 CCT8P50990 548 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 PKN3Q6P5Z2 889 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 MMTAG2Q9BU76 263 aaKnown RBP11.4□□□□□ -0.58
USP31-201ENST00000219689 MIA3Q5JRA6 1907 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 CLRN2A0PK11 232 aa11.4□□□□□ -0.59
USP31-201ENST00000219689 SLFN13Q68D06 897 aa11.4□□□□□ -0.59
USP31-201ENST00000219689 GJB7Q6PEY0 223 aa11.4□□□□□ -0.59
USP31-201ENST00000219689 GUF1Q8N442 669 aaKnown RBP11.4□□□□□ -0.59
USP31-201ENST00000219689 CHURC1Q8WUH1 139 aa11.4□□□□□ -0.59
USP31-201ENST00000219689 RUVBL2Q9Y230 463 aaKnown RBP11.4□□□□□ -0.59
USP31-201ENST00000219689 LOC110117498-PIK3R3F6TDL0 507 aa11.4□□□□□ -0.59
USP31-201ENST00000219689 SOAT1P35610 550 aa11.4□□□□□ -0.59
USP31-201ENST00000219689 GLRBP48167 497 aa11.4□□□□□ -0.59
USP31-201ENST00000219689 KRT74Q7RTS7 529 aa11.4□□□□□ -0.59
USP31-201ENST00000219689 MAGEE2Q8TD90 523 aaPredicted RBP11.4□□□□□ -0.59
USP31-201ENST00000219689 SYTL5Q8TDW5 730 aaPredicted RBP11.4□□□□□ -0.59
USP31-201ENST00000219689 PRDM15P57071 1507 aaPredicted RBP11.39□□□□□ -0.59
USP31-201ENST00000219689 ZMPSTE24O75844 475 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 WARSP23381 471 aaKnown RBP11.39□□□□□ -0.59
USP31-201ENST00000219689 CCND2P30279 289 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 ACLYP53396 1101 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 PFKFB3Q16875 520 aaPredicted RBP11.39□□□□□ -0.59
USP31-201ENST00000219689 EPHX4Q8IUS5 362 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 SNX31Q8N9S9 440 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 SCFD2Q8WU76 684 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 DUSP12Q9UNI6 340 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 DCXO43602 365 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 ITGA4P13612 1032 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 UQCRBP14927 111 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 ITGA9Q13797 1035 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 ACAP2Q15057 778 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 CERKLQ49MI3 558 aaPredicted RBP11.39□□□□□ -0.59
USP31-201ENST00000219689 LRRC17Q8N6Y2 441 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 STARD13Q9Y3M8 1113 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 DDX3XO00571 662 aaKnown RBP eCLIP11.39□□□□□ -0.59
USP31-201ENST00000219689 LDLRP01130 860 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 PRLRP16471 622 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 ATN1P54259 1190 aaPredicted RBP11.39□□□□□ -0.59
USP31-201ENST00000219689 RHAGQ02094 409 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 STK32CQ86UX6 486 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 TSEN34Q9BSV6 310 aaKnown RBP11.39□□□□□ -0.59
USP31-201ENST00000219689 NCKAP5LQ9HCH0 1330 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 INO80Q9ULG1 1556 aaPredicted RBP11.39□□□□□ -0.59
USP31-201ENST00000219689 KLHL33A6NCF5 533 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 DPP10Q8N608 796 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 DNAJC7Q99615 494 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 THAP1Q9NVV9 213 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 ERCC2P18074 760 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 GRK3P35626 688 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 NCALDP61601 193 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 DLG4P78352 724 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 DDB1Q16531 1140 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 PGS1Q32NB8 556 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 ATP13A5Q4VNC0 1218 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 SLC52A2Q9HAB3 445 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 CYP4F12Q9HCS2 524 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 ETNK2Q9NVF9 386 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 TMEM260Q9NX78 707 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 TOP3BO95985 862 aaKnown RBP11.39□□□□□ -0.59
USP31-201ENST00000219689 CYP2D6P10635 497 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 SLC26A3P40879 764 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 NFYCQ13952 458 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 TTI2Q6NXR4 508 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 RTKN2Q8IZC4 609 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 CCDC24Q8N4L8 307 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 GRPEL2Q8TAA5 225 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 TPD52L3Q96J77 140 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 MARK4Q96L34 752 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 WDR11Q9BZH6 1224 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 LACRTQ9GZZ8 138 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 LCP1P13796 627 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 ANXA13P27216 316 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 RPL10AP62906 217 aaKnown RBP11.39□□□□□ -0.59
USP31-201ENST00000219689 KCTD2Q14681 263 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 SLC13A5Q86YT5 568 aaPredicted RBP11.39□□□□□ -0.59
USP31-201ENST00000219689 SHCBP1Q8NEM2 672 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 IRF2BPLQ9H1B7 796 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 PNMA6FA0A0J9YX94 578 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 PSAPP07602 524 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 USP17L8P0C7I0 530 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 PPP3CCP48454 512 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 C5orf22Q49AR2 442 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 BHLHB9Q6PI77 547 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 PID1Q7Z2X4 250 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 RHOBTB2Q9BYZ6 727 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 SP140LQ9H930 580 aa11.39□□□□□ -0.59
USP31-201ENST00000219689 TBXAS1P24557 533 aaPredicted RBP11.38□□□□□ -0.59
USP31-201ENST00000219689 RPL21P46778 160 aaKnown RBP11.38□□□□□ -0.59
USP31-201ENST00000219689 MTERF2Q49AM1 385 aa11.38□□□□□ -0.59
USP31-201ENST00000219689 ZFC3H1O60293 1989 aaKnown RBP11.38□□□□□ -0.59
USP31-201ENST00000219689 CCNIQ14094 377 aa11.38□□□□□ -0.59
USP31-201ENST00000219689 FAM47CQ5HY64 1035 aa11.38□□□□□ -0.59
USP31-201ENST00000219689 TCF7L2Q9NQB0 619 aa11.38□□□□□ -0.59
USP31-201ENST00000219689 ZHX2Q9Y6X8 837 aa11.38□□□□□ -0.59
USP31-201ENST00000219689 KHDRBS3O75525 346 aaKnown RBP11.38□□□□□ -0.59
USP31-201ENST00000219689 FMO5P49326 533 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms