RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 PSMC3IPQ9P2W1 217 aaPredicted RBP4.4□□□□□ -1.71
CFTR-201ENST00000003084 CLCA2Q9UQC9 943 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 USP20Q9Y2K6 914 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 CDY2AQ9Y6F7 541 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 TAF6LQ9Y6J9 622 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 CAPN7Q9Y6W3 813 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 CHD2O14647 1828 aaKnown RBP4.4□□□□□ -1.71
CFTR-201ENST00000003084 USP2O75604 605 aaPredicted RBP4.4□□□□□ -1.71
CFTR-201ENST00000003084 ERBB2P04626 1255 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 MMEP08473 750 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 CXCL8P10145 99 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 GHRP10912 638 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 ZNF16P17020 682 aaPredicted RBP4.4□□□□□ -1.71
CFTR-201ENST00000003084 ACO1P21399 889 aaKnown RBP4.4□□□□□ -1.71
CFTR-201ENST00000003084 RAP1GAPP47736 663 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 TKTL1P51854 596 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 ZNF200P98182 395 aaPredicted RBP4.4□□□□□ -1.71
CFTR-201ENST00000003084 CNTN2Q02246 1040 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 GCNT1Q02742 428 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 PRKCQQ04759 706 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 TWF1Q12792 350 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 SNCBQ16143 134 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 ZSCAN26Q16670 478 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 FAM171A1Q5VUB5 890 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 TRIM48Q8IWZ4 208 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 SNX31Q8N9S9 440 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 SPATA18Q8TC71 538 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 ZSWIM1Q9BR11 485 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 ADGRE3Q9BY15 652 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 PHACTR1Q9C0D0 580 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 DDX47Q9H0S4 455 aaKnown RBP4.4□□□□□ -1.71
CFTR-201ENST00000003084 CISHQ9NSE2 258 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 C20orf96Q9NUD7 363 aaPredicted RBP4.4□□□□□ -1.71
CFTR-201ENST00000003084 NMRK1Q9NWW6 199 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 UTP6Q9NYH9 597 aaKnown RBP4.4□□□□□ -1.71
CFTR-201ENST00000003084 HDAC6Q9UBN7 1215 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 CRLS1Q9UJA2 301 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 NCKAP1Q9Y2A7 1128 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 NEU2Q9Y3R4 380 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 LRRC37A3O60309 1634 aa4.4□□□□□ -1.71
CFTR-201ENST00000003084 WDR91A4D1P6 747 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 CCR1P32246 355 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 HSPA9P38646 679 aaKnown RBP4.39□□□□□ -1.71
CFTR-201ENST00000003084 TBX4P57082 545 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 MYL6P60660 151 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 EFEMP1Q12805 493 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 CENPPQ6IPU0 288 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 PAOXQ6QHF9 649 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 SLC9A9Q8IVB4 645 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 SUGP1Q8IWZ8 645 aaKnown RBP4.39□□□□□ -1.71
CFTR-201ENST00000003084 SLC25A41Q8N5S1 370 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 NCLNQ969V3 563 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 CBWD1Q9BRT8 395 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 ASPSCR1Q9BZE9 553 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 MIR1-1HGQ9H1L0 117 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.39□□□□□ -1.71
CFTR-201ENST00000003084 PCDHGB4Q9UN71 923 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 SNCAIPQ9Y6H5 919 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 COL1A1P02452 1464 aaPredicted RBP4.39□□□□□ -1.71
CFTR-201ENST00000003084 A0A0G2JLL6 359 aaPredicted RBP4.39□□□□□ -1.71
CFTR-201ENST00000003084 MAGEB16A2A368 324 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 HEATR9A2RTY3 570 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 HACD1B0YJ81 288 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 F5H423 210 aaPredicted RBP4.39□□□□□ -1.71
CFTR-201ENST00000003084 HNRNPCL1O60812 293 aaKnown RBP4.39□□□□□ -1.71
CFTR-201ENST00000003084 CKMP06732 381 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 EPHB2P29323 1055 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 CYP2C18P33260 490 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 COILP38432 576 aaPredicted RBP4.39□□□□□ -1.71
CFTR-201ENST00000003084 IKZF1Q13422 519 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 PPIGQ13427 754 aaKnown RBP eCLIP4.39□□□□□ -1.71
CFTR-201ENST00000003084 ZRANB3Q5FWF4 1079 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 DCLRE1AQ6PJP8 1040 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 ANGPTL8Q6UXH0 198 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 PRRT2Q7Z6L0 340 aaPredicted RBP4.39□□□□□ -1.71
CFTR-201ENST00000003084 CCNYL1Q8N7R7 359 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 INTS10Q9NVR2 710 aaKnown RBP4.39□□□□□ -1.71
CFTR-201ENST00000003084 DNPEPQ9ULA0 475 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 CDH9Q9ULB4 789 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 PLA2G4CQ9UP65 541 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 SF3B1O75533 1304 aaKnown RBP eCLIP4.39□□□□□ -1.71
CFTR-201ENST00000003084 TRAV19A0A0A6YYK7 116 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 STX7O15400 261 aaKnown RBP4.39□□□□□ -1.71
CFTR-201ENST00000003084 GRAP2O75791 330 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 MICAL2O94851 1124 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 POMCP01189 267 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 VARSP26640 1264 aaKnown RBP4.39□□□□□ -1.71
CFTR-201ENST00000003084 SESN2P58004 480 aaPredicted RBP4.39□□□□□ -1.71
CFTR-201ENST00000003084 BEX3Q00994 111 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 GRIK3Q13003 919 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 USP10Q14694 798 aaKnown RBP4.39□□□□□ -1.71
CFTR-201ENST00000003084 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.39□□□□□ -1.71
CFTR-201ENST00000003084 ZNF284Q2VY69 593 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 NOMO2Q5JPE7 1267 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 ERMARDQ5T6L9 678 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 NT5DC1Q5TFE4 455 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 MRNIPQ6NTE8 343 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 C11orf63Q6NUN7 778 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 TTI2Q6NXR4 508 aa4.39□□□□□ -1.71
CFTR-201ENST00000003084 SPATA4Q8NEY3 305 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms