RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Fbxl13Q8CDU4 790 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Uhrf1Q8VDF2 782 aaKnown RBP7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tubb2bQ9CWF2 445 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Susd3Q9D176 269 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 PgcQ9D7R7 392 aa7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Orc1Q9Z1N2 840 aaKnown RBP7.19□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Lcn6A2AJB9 181 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gm2030D3Z7C4 212 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Farp1F8VPU2 1048 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Stk10O55098 966 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Dync1i2O88487 612 aaKnown RBP7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 H2afzP0C0S6 128 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Krt19P19001 403 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 GcP21614 476 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ighmbp2P40694 993 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 S100a5P63084 93 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 VcpQ01853 806 aaKnown RBP7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 H2afvQ3THW5 128 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Luc7l3Q5SUF2 432 aaKnown RBP7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Eif2b4Q61749 524 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 RetsatQ64FW2 609 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Adck2Q6NSR3 617 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tmc8Q7TN58 722 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 RbsnQ80Y56 783 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Best2Q8BGM5 508 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Nipal1Q8BMW7 416 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Arl8aQ8VEH3 186 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ppa2Q91VM9 330 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Sytl2Q99N50 950 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 EtfbQ9DCW4 255 aaKnown RBP7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Il17rbQ9JIP3 499 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cacna1dQ99246 2179 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Casp8ap2Q9WUF3 1962 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 2210011C24RikA0A087WQ89 206 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gbp6A0A0G2JDV3 611 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ccnyl1D3YUJ3 367 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Rad51ap2G3UW63 976 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gm43302L7N1X8 611 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 CaluO35887 315 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Kcnu1O54982 1121 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ncf2O70145 525 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Becn2P0DM65 447 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Senp1P59110 640 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tbc1d1Q60949 1255 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Msi1Q61474 362 aaKnown RBP7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Dnajc1Q61712 552 aaKnown RBP7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Heatr6Q6P1G0 1184 aaKnown RBP7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Znf280cQ6P3Y5 742 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Naif1Q6PFD7 327 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Prss50Q8BLH5 439 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 HscbQ8K3A0 234 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tspan8Q8R3G9 235 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ptcd2Q8R3K3 381 aaKnown RBP7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Nle1Q8VEJ4 485 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ppp1r16aQ923M0 524 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Slc12a6Q924N4 1150 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Golph3Q9CRA5 298 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Mgat4dQ9D4R2 373 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Scube2Q9JJS0 997 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Umodl1Q5DID3 1319 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Hsd17b14E9Q3D4 273 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Serpinb6eI7HJI3 429 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Nedd9O35177 833 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Xirp1O70373 1129 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tars2Q3UQ84 723 aaKnown RBP7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Foxd4Q60688 444 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gpr19Q61121 415 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cct6bQ61390 531 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Wee2Q66JT0 555 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cdc23Q8BGZ4 597 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Olfml3Q8BK62 406 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Mei4Q8BRM6 389 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Slc9b1Q8C0X2 565 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Trim61Q8JZK6 461 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Irak4Q8R4K2 459 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Sgms1Q8VCQ6 419 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Col26a1Q91VF6 440 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Map4k3Q99JP0 894 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Cul2Q9D4H8 745 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Trim10Q9WUH5 489 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 M1apQ9Z0E1 529 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 HnrnpcQ9Z204 313 aaKnown RBP7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Atad5Q4QY64 1826 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ect2lA0A140LIP2 953 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Spata31d1dE9Q5W2 1247 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 RcvrnP34057 202 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Slc12a2P55012 1205 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ntsr2P70310 416 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Lrriq3Q14DL3 633 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ceacam5Q3UKK2 947 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Ptpn14Q62130 1189 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tpp2Q64514 1262 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Txndc8Q69AB2 127 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Inppl1Q6P549 1257 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Gpt2Q8BGT5 522 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Tsen34Q8BMZ5 316 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Smtnl2Q8CI12 456 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Mrfap1Q9CQL7 125 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 PmpcbQ9CXT8 489 aa7.18□□□□□ -1.26
Bdnf-201ENSMUST00000053317 Rrp15Q9CYX7 281 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms