RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Taf6lQ8R2K4 616 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rps6kl1Q8R2S1 544 aa17.07■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rad54lP70270 747 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 InvsO89019 1062 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rps7P62082 194 aaKnown RBP17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Mcm9Q2KHI9 1134 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ankmy2Q3TPE9 440 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Nab1Q61122 486 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Foxn1Q61575 648 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Klf6O08584 283 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 BC051142Q3V0M8 400 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Cops7bQ8BV13 264 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Cep97Q9CZ62 856 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Cog8Q9JJA2 640 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Adad1Q5SUE7 619 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Klra8Q60682 266 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Capn10Q9ESK3 666 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Olfr271-ps1A0A1L1SQH2 283 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Zfp780bE9Q2S6 806 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Zfp607aQ3TQG9 686 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rbm44Q3V089 1013 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Cand2Q6ZQ73 1235 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Raver2Q7TPD6 673 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 P2ry10Q8BFU7 328 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Mief1Q8BGV8 463 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Hao1Q9WU19 370 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Mbd2Q9Z2E1 414 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Gm10477F6SW83 55 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 BC030870Q3V2G4 71 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Papd7Q6PB75 542 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Otop3Q80UF9 577 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Osbpl2Q8BX94 484 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Q99LU8 229 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Gm28168A0A087WNP1 180 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Zfy1P10925 782 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Lcp1Q61233 627 aaKnown RBP17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Luzp2Q8BGY3 345 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Mical2Q8BML1 960 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Zfp398Q8BV16 643 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Vangl2Q91ZD4 521 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 BcamQ9R069 622 aa17.06■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Zbed6D2EAC2 980 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Grk4O70291 574 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 H2afxP27661 143 aaKnown RBP17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ninj2Q9JL89 143 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Scgb2b7D3YYY1 112 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Alkbh1P0CB42 389 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Celf4Q7TSY6 486 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Llgl1Q80Y17 1036 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Prr33Q8C494 260 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 PpidQ9CR16 370 aaKnown RBP17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 S100pbpQ9D5K4 396 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Mid2Q9QUS6 705 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ahdc1Q6PAL7 1594 aaKnown RBP17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ttc23lA6H6E9 458 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Sept9Q80UG5 583 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Rxfp2Q91ZZ5 737 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Scgb2b21A0A087WQA9 112 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Arid5aQ3U108 590 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Znf879Q8BI99 563 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Syce2Q505B8 171 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ssxb10Q6XAR7 170 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Cdyl2Q9D5D8 503 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Oip5A2AQ14 241 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Pcdh9F8VPK8 1237 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Bcat1P24288 386 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Dctn2Q99KJ8 402 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ap3s1Q9DCR2 193 aa17.05■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Fam214aQ69ZK7 1075 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Smarca1Q6PGB8 1046 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Znf521Q6KAS7 1311 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Trim30bE9PVL6 203 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Fgf15O35622 218 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ces4aQ8R0W5 563 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Tbc1d13Q8R3D1 400 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Polr3hQ9D2C6 204 aaKnown RBP17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Myom1Q62234 1667 aaKnown RBP17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ppm1aP49443 382 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Slc26a2Q62273 739 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Pi4kbQ8BKC8 816 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Acsm2Q8K0L3 575 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Eif2ak3Q9Z2B5 1114 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Gm5478D3Z6R0 159 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Myl6Q60605 151 aaKnown RBP17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Epsti1Q8VDI1 314 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Pdk3Q922H2 415 aaKnown RBP17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Snx7Q9CY18 387 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Cep72Q9D3R3 646 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Slc1a2P43006 572 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Grid2ipQ0QWG9 1203 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Naif1Q6PFD7 327 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Tmc8Q7TN58 722 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ticam2Q8BJQ4 232 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Q9D9D9 101 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Plekha6Q7TQG1 1173 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Lrrc1Q80VQ1 524 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 ClyblQ8R4N0 338 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 PtenO08586 403 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ptch2O35595 1182 aa17.04■□□□□ 0.32
Ccdc88a-201ENSMUST00000040182 Ptpn5P54830 541 aa17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms