RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Mup7E9QA79 235 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Mup6P02762 180 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Cd2P08920 344 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Mup1P11588 180 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Mup2P11589 180 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 RarbP22605 482 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Tac1P41539 130 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Rab6bP61294 208 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Serpina1eQ00898 413 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 9130409I23RikQ3TS87 320 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Arhgap30Q640N3 1101 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Fam114a2Q8VE88 497 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Ciapin1Q8WTY4 309 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Snx9Q91VH2 595 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Trex1Q91XB0 314 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Decr1Q9CQ62 335 aaKnown RBP18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Pi16Q9ET66 489 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Olig1Q9JKN5 260 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Zscan12Q9Z1D7 501 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Fer1l6E0CZ42 1862 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Impa1O55023 277 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Cd3gP11942 182 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Acvrl1Q61288 502 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 ItpkcQ7TS72 678 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Mfn1Q811U4 741 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Kiaa0319lQ8K135 1048 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Ipo11Q8K2V6 975 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Sept6Q9R1T4 434 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Hmgxb3G3X9M3 1254 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Rpl10aP53026 217 aaKnown RBP18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Q3UE31 404 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Gm4981Q3ULJ8 291 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Pcnx4Q3UVY5 1174 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Clec4b1Q7TS58 209 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 PaoxQ8C0L6 504 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Tmem221Q8K071 230 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Alg9Q8VDI9 611 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Pacsin3Q99JB8 424 aa18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Dkc1Q9ESX5 509 aaKnown RBP18.36■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Col2a1P28481 1487 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Gm3173A6NAS3 172 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Ism2D3Z6A3 493 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Gm3020E9Q3J7 150 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Gm10479K7N6H4 105 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Gm2897K7N6T7 172 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Vmn2r39L7N2E5 861 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Lypla1P97823 230 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 CblbQ3TTA7 982 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Fdxacb1Q3UY23 622 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 LbpQ61805 481 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Ipo5Q8BKC5 1097 aaKnown RBP18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Trim35Q8C006 501 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Gm3411Q8C7R2 150 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Agbl2Q8CDK2 862 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 CabyrQ9D424 453 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Cul2Q9D4H8 745 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Caln1Q9JJG7 219 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Mtmr2Q9Z2D1 643 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Dpysl4O35098 572 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Itgb5O70309 798 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Cbx3P23198 183 aaKnown RBP18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 GsrP47791 500 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Atp6v1b2P62814 511 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Tarbp2P97473 365 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Dok7Q18PE0 504 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Zbtb48Q1H9T6 681 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Sfi1Q3UZY0 1216 aaKnown RBP18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Nr1h2Q60644 446 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Chi3l1Q61362 389 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Map2k2Q63932 401 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Lsm8Q6ZWM4 96 aaKnown RBP18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Nsun6Q7TS68 476 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Ip6k2Q80V72 448 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Alkbh8Q80Y20 664 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 StgQ8BM15 349 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 HscbQ8K3A0 234 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Tdrd3Q91W18 743 aaKnown RBP18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Wrnip1Q91XU0 660 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Cst12Q9DAN8 128 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Leng1Q9DB98 261 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Psmg1Q9JK23 289 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Dach1Q9QYB2 751 aa18.35■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Ccdc8D3YZV8 685 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Fignl2J3QK54 644 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 RxrgP28705 463 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Nat1P50294 290 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Jdp2P97875 163 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Zscan2Q07230 614 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Slfn4Q3UV66 602 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Mief2Q5NCS9 454 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Zfyve28Q6ZPK7 905 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Wdtc1Q80ZK9 677 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Unc45bQ8CGY6 931 aaKnown RBP18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 LzicQ8K3C3 190 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Vmn1r213Q8R278 384 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Zdhhc13Q9CWU2 622 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Tssk3Q9D2E1 268 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 TfebQ9R210 475 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Slc26a3Q9WVC8 757 aa18.34■□□□□ 0.53
Sqstm1-201ENSMUST00000015981 Vmn2r25W4VSP2 855 aa18.34■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms