RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 ESP1Q03018 1630 aa-5.06□□□□□ -3.22
snR56snR56 BCK1Q01389 1478 aa-5.1□□□□□ -3.23
snR56snR56 RPO31P04051 1460 aa-5.12□□□□□ -3.23
snR56snR56 ZEO1Q08245 113 aa-5.13□□□□□ -3.23
snR56snR56 YOL166W-AQ8TGJ1 51 aa-5.13□□□□□ -3.23
snR56snR56 IML1P47170 1584 aa-5.16□□□□□ -3.23
snR56snR56 PDR5P33302 1511 aaKnown RBP-5.17□□□□□ -3.24
snR56snR56 YOL131WQ08270 108 aa-5.18□□□□□ -3.24
snR56snR56 VMR1P38735 1592 aa-5.19□□□□□ -3.24
snR56snR56 ESC1Q03661 1658 aaKnown RBP-5.2□□□□□ -3.24
snR56snR56 SSK2P53599 1579 aa-5.21□□□□□ -3.24
snR56snR56 DOP1Q03921 1698 aa-5.24□□□□□ -3.25
snR56snR56 TCB3Q03640 1545 aaKnown RBP-5.25□□□□□ -3.25
snR56snR56 UFD4P33202 1483 aa-5.26□□□□□ -3.25
snR56snR56 YHR073W-AP0C5N7 58 aa-5.32□□□□□ -3.26
snR56snR56 YCF1P39109 1515 aaKnown RBP-5.33□□□□□ -3.26
snR56snR56 YSY6P38374 65 aa-5.38□□□□□ -3.27
snR56snR56 ULS1Q08562 1619 aa-5.41□□□□□ -3.28
snR56snR56 YFL041W-AQ3E817 63 aa-5.47□□□□□ -3.29
snR56snR56 NUP188P52593 1655 aaKnown RBP-5.5□□□□□ -3.29
snR56snR56 YPR010C-AA5Z2X5 72 aa-5.5□□□□□ -3.29
snR56snR56 GCN2P15442 1659 aa-5.51□□□□□ -3.29
snR56snR56 YBT1P32386 1661 aa-5.54□□□□□ -3.3
snR56snR56 SCC2Q04002 1493 aa-5.56□□□□□ -3.3
snR56snR56 YJL133C-AQ3E7A3 74 aa-5.58□□□□□ -3.3
snR56snR56 YIL102C-AQ2V2P5 75 aa-5.65□□□□□ -3.31
snR56snR56 YHR213W-AQ8TGT4 77 aa-5.68□□□□□ -3.32
snR56snR56 CDC25P04821 1589 aa-5.68□□□□□ -3.32
snR56snR56 NUP159P40477 1460 aa-5.72□□□□□ -3.33
snR56snR56 STU1P38198 1513 aa-5.73□□□□□ -3.33
snR56snR56 DDR2P89113 61 aa-5.8□□□□□ -3.34
snR56snR56 ATG2P53855 1592 aa-5.81□□□□□ -3.34
snR56snR56 BUD3P25558 1636 aa-5.89□□□□□ -3.35
snR56snR56 PAI3P01094 68 aa-5.92□□□□□ -3.36
snR56snR56 MYO4P32492 1471 aa-5.93□□□□□ -3.36
snR56snR56 COX9P07255 59 aa-5.96□□□□□ -3.36
snR56snR56 HIR3P47171 1648 aa-6.12□□□□□ -3.39
snR56snR56 SKI3P17883 1432 aaKnown RBP-6.15□□□□□ -3.39
snR56snR56 TOM1Q03280 3268 aa-6.17□□□□□ -3.4
snR56snR56 YLR342W-AQ3E810 57 aa-6.17□□□□□ -3.4
snR56snR56 NUP170P38181 1502 aa-6.18□□□□□ -3.4
snR56snR56 YKL023C-AQ2V2P3 75 aa-6.24□□□□□ -3.41
snR56snR56 YJL127C-BQ3E828 52 aa-6.3□□□□□ -3.42
snR56snR56 YLL066W-BQ8TGJ7 56 aa-6.34□□□□□ -3.42
snR56snR56 VMA9Q3E7B6 73 aa-6.35□□□□□ -3.43
snR56snR56 PEP1P32319 1579 aa-6.39□□□□□ -3.43
snR56snR56 NUP192P47054 1683 aa-6.42□□□□□ -3.44
snR56snR56 PMP3P87284 55 aa-6.47□□□□□ -3.45
snR56snR56 USO1P25386 1790 aa-6.5□□□□□ -3.45
snR56snR56 SMX2P40204 77 aaKnown RBP-6.74□□□□□ -3.49
snR56snR56 MON2P48563 1636 aaPredicted RBP-6.76□□□□□ -3.49
snR56snR56 RKR1Q04781 1562 aa-6.78□□□□□ -3.5
snR56snR56 HOR7Q05827 59 aa-6.82□□□□□ -3.5
snR56snR56 YFR010W-AP0C5N0 62 aa-6.86□□□□□ -3.51
snR56snR56 CHC1P22137 1653 aaKnown RBP-6.94□□□□□ -3.52
snR56snR56 SPT6P23615 1451 aaKnown RBP-7□□□□□ -3.53
snR56snR56 MLP2P40457 1679 aa-7.09□□□□□ -3.54
snR56snR56 TOM7P53507 60 aa-7.2□□□□□ -3.56
snR56snR56 NCE101Q02820 53 aa-7.96□□□□□ -3.68
snR56snR56 RPL39P04650 51 aa-8.54□□□□□ -3.78
snR56snR56 Q0297Q9ZZV8 51 aa-8.61□□□□□ -3.79
snR56snR56 YIL046W-AQ3E7Z4 54 aa-9.32□□□□□ -3.9
snR56snR56 YDR034W-BQ6Q5X2 51 aa-10.81□□□□□ -4.14
Retrieved 63 of 5,963 RNA–protein pairs in 49.4 ms