RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 YOL131WQ08270 108 aa-5.74□□□□□ -3.33
snR47snR47 YCR075W-AQ3E830 75 aa-5.74□□□□□ -3.33
snR47snR47 LTE1P07866 1435 aa-5.74□□□□□ -3.33
snR47snR47 PDR5P33302 1511 aaKnown RBP-5.77□□□□□ -3.33
snR47snR47 YHR073W-AP0C5N7 58 aa-5.79□□□□□ -3.34
snR47snR47 ESC1Q03661 1658 aaKnown RBP-5.84□□□□□ -3.34
snR47snR47 ZEO1Q08245 113 aa-5.84□□□□□ -3.34
snR47snR47 SSK2P53599 1579 aa-5.84□□□□□ -3.35
snR47snR47 BCK1Q01389 1478 aa-5.85□□□□□ -3.35
snR47snR47 IML1P47170 1584 aa-5.87□□□□□ -3.35
snR47snR47 YOL166W-AQ8TGJ1 51 aa-5.87□□□□□ -3.35
snR47snR47 DOP1Q03921 1698 aa-5.89□□□□□ -3.35
snR47snR47 ULS1Q08562 1619 aa-5.91□□□□□ -3.36
snR47snR47 YCF1P39109 1515 aaKnown RBP-5.91□□□□□ -3.36
snR47snR47 VMR1P38735 1592 aa-5.95□□□□□ -3.36
snR47snR47 TCB3Q03640 1545 aaKnown RBP-5.99□□□□□ -3.37
snR47snR47 UFD4P33202 1483 aa-6.02□□□□□ -3.37
snR47snR47 GCN2P15442 1659 aa-6.05□□□□□ -3.38
snR47snR47 YSY6P38374 65 aa-6.06□□□□□ -3.38
snR47snR47 YFL041W-AQ3E817 63 aa-6.08□□□□□ -3.38
snR47snR47 YJL133C-AQ3E7A3 74 aa-6.1□□□□□ -3.39
snR47snR47 YPR010C-AA5Z2X5 72 aa-6.14□□□□□ -3.39
snR47snR47 NUP188P52593 1655 aaKnown RBP-6.16□□□□□ -3.4
snR47snR47 YBT1P32386 1661 aa-6.23□□□□□ -3.41
snR47snR47 CDC25P04821 1589 aa-6.35□□□□□ -3.43
snR47snR47 YIL102C-AQ2V2P5 75 aa-6.38□□□□□ -3.43
snR47snR47 STU1P38198 1513 aa-6.41□□□□□ -3.44
snR47snR47 DDR2P89113 61 aa-6.42□□□□□ -3.44
snR47snR47 SCC2Q04002 1493 aa-6.42□□□□□ -3.44
snR47snR47 YHR213W-AQ8TGT4 77 aa-6.48□□□□□ -3.45
snR47snR47 COX9P07255 59 aa-6.53□□□□□ -3.45
snR47snR47 ATG2P53855 1592 aa-6.55□□□□□ -3.46
snR47snR47 NUP159P40477 1460 aa-6.63□□□□□ -3.47
snR47snR47 PAI3P01094 68 aa-6.68□□□□□ -3.48
snR47snR47 BUD3P25558 1636 aa-6.69□□□□□ -3.48
snR47snR47 HIR3P47171 1648 aa-6.76□□□□□ -3.49
snR47snR47 MYO4P32492 1471 aa-6.78□□□□□ -3.49
snR47snR47 TOM1Q03280 3268 aa-6.78□□□□□ -3.49
snR47snR47 YLR342W-AQ3E810 57 aa-6.82□□□□□ -3.5
snR47snR47 SKI3P17883 1432 aaKnown RBP-6.9□□□□□ -3.51
snR47snR47 YJL127C-BQ3E828 52 aa-6.9□□□□□ -3.51
snR47snR47 YLL066W-BQ8TGJ7 56 aa-6.95□□□□□ -3.52
snR47snR47 NUP170P38181 1502 aa-7.01□□□□□ -3.53
snR47snR47 PMP3P87284 55 aa-7.02□□□□□ -3.53
snR47snR47 YKL023C-AQ2V2P3 75 aa-7.11□□□□□ -3.55
snR47snR47 USO1P25386 1790 aa-7.15□□□□□ -3.55
snR47snR47 VMA9Q3E7B6 73 aa-7.18□□□□□ -3.56
snR47snR47 PEP1P32319 1579 aa-7.23□□□□□ -3.57
snR47snR47 NUP192P47054 1683 aa-7.24□□□□□ -3.57
snR47snR47 SMX2P40204 77 aaKnown RBP-7.37□□□□□ -3.59
snR47snR47 MON2P48563 1636 aaPredicted RBP-7.41□□□□□ -3.6
snR47snR47 HOR7Q05827 59 aa-7.49□□□□□ -3.61
snR47snR47 CHC1P22137 1653 aaKnown RBP-7.57□□□□□ -3.62
snR47snR47 RKR1Q04781 1562 aa-7.58□□□□□ -3.62
snR47snR47 SPT6P23615 1451 aaKnown RBP-7.75□□□□□ -3.65
snR47snR47 TOM7P53507 60 aa-7.77□□□□□ -3.65
snR47snR47 YFR010W-AP0C5N0 62 aa-7.8□□□□□ -3.66
snR47snR47 MLP2P40457 1679 aa-7.83□□□□□ -3.66
snR47snR47 NCE101Q02820 53 aa-8.73□□□□□ -3.81
snR47snR47 RPL39P04650 51 aa-9.27□□□□□ -3.89
snR47snR47 Q0297Q9ZZV8 51 aa-9.31□□□□□ -3.9
snR47snR47 YIL046W-AQ3E7Z4 54 aa-10.22□□□□□ -4.05
snR47snR47 YDR034W-BQ6Q5X2 51 aa-11.69□□□□□ -4.28
Retrieved 63 of 5,963 RNA–protein pairs in 141.3 ms