RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 RPO31P04051 1460 aa-5.07□□□□□ -3.22
snR38snR38 ERI1P62651 68 aaKnown RBP-5.08□□□□□ -3.22
snR38snR38 LTE1P07866 1435 aa-5.08□□□□□ -3.22
snR38snR38 SSK2P53599 1579 aa-5.12□□□□□ -3.23
snR38snR38 ULS1Q08562 1619 aa-5.14□□□□□ -3.23
snR38snR38 IML1P47170 1584 aa-5.15□□□□□ -3.23
snR38snR38 CWP2P43497 92 aa-5.15□□□□□ -3.23
snR38snR38 YOL131WQ08270 108 aa-5.15□□□□□ -3.23
snR38snR38 YCF1P39109 1515 aaKnown RBP-5.16□□□□□ -3.24
snR38snR38 ESC1Q03661 1658 aaKnown RBP-5.17□□□□□ -3.24
snR38snR38 YCR075W-AQ3E830 75 aa-5.18□□□□□ -3.24
snR38snR38 TCB3Q03640 1545 aaKnown RBP-5.18□□□□□ -3.24
snR38snR38 DOP1Q03921 1698 aa-5.18□□□□□ -3.24
snR38snR38 VMR1P38735 1592 aa-5.2□□□□□ -3.24
snR38snR38 YOL166W-AQ8TGJ1 51 aa-5.21□□□□□ -3.24
snR38snR38 GCN2P15442 1659 aa-5.24□□□□□ -3.25
snR38snR38 ZEO1Q08245 113 aa-5.25□□□□□ -3.25
snR38snR38 NUP188P52593 1655 aaKnown RBP-5.34□□□□□ -3.26
snR38snR38 YJL133C-AQ3E7A3 74 aa-5.35□□□□□ -3.27
snR38snR38 YFL041W-AQ3E817 63 aa-5.35□□□□□ -3.27
snR38snR38 UFD4P33202 1483 aa-5.36□□□□□ -3.27
snR38snR38 YSY6P38374 65 aa-5.38□□□□□ -3.27
snR38snR38 YPR010C-AA5Z2X5 72 aa-5.45□□□□□ -3.28
snR38snR38 YBT1P32386 1661 aa-5.49□□□□□ -3.29
snR38snR38 STU1P38198 1513 aa-5.56□□□□□ -3.3
snR38snR38 CDC25P04821 1589 aa-5.59□□□□□ -3.3
snR38snR38 DDR2P89113 61 aa-5.61□□□□□ -3.31
snR38snR38 COX9P07255 59 aa-5.64□□□□□ -3.31
snR38snR38 YIL102C-AQ2V2P5 75 aa-5.66□□□□□ -3.32
snR38snR38 SCC2Q04002 1493 aa-5.67□□□□□ -3.32
snR38snR38 ATG2P53855 1592 aa-5.71□□□□□ -3.32
snR38snR38 YHR213W-AQ8TGT4 77 aa-5.78□□□□□ -3.33
snR38snR38 BUD3P25558 1636 aa-5.83□□□□□ -3.34
snR38snR38 TOM1Q03280 3268 aa-5.84□□□□□ -3.34
snR38snR38 HIR3P47171 1648 aa-5.85□□□□□ -3.35
snR38snR38 NUP159P40477 1460 aa-5.88□□□□□ -3.35
snR38snR38 PAI3P01094 68 aa-5.96□□□□□ -3.36
snR38snR38 MYO4P32492 1471 aa-5.98□□□□□ -3.37
snR38snR38 YLL066W-BQ8TGJ7 56 aa-6.01□□□□□ -3.37
snR38snR38 YLR342W-AQ3E810 57 aa-6.02□□□□□ -3.37
snR38snR38 NUP170P38181 1502 aa-6.07□□□□□ -3.38
snR38snR38 YJL127C-BQ3E828 52 aa-6.08□□□□□ -3.38
snR38snR38 SKI3P17883 1432 aaKnown RBP-6.09□□□□□ -3.38
snR38snR38 PMP3P87284 55 aa-6.1□□□□□ -3.39
snR38snR38 YKL023C-AQ2V2P3 75 aa-6.2□□□□□ -3.4
snR38snR38 PEP1P32319 1579 aa-6.27□□□□□ -3.41
snR38snR38 USO1P25386 1790 aa-6.29□□□□□ -3.42
snR38snR38 VMA9Q3E7B6 73 aa-6.34□□□□□ -3.42
snR38snR38 NUP192P47054 1683 aa-6.34□□□□□ -3.42
snR38snR38 MON2P48563 1636 aaPredicted RBP-6.42□□□□□ -3.44
snR38snR38 SMX2P40204 77 aaKnown RBP-6.44□□□□□ -3.44
snR38snR38 HOR7Q05827 59 aa-6.48□□□□□ -3.45
snR38snR38 CHC1P22137 1653 aaKnown RBP-6.59□□□□□ -3.46
snR38snR38 RKR1Q04781 1562 aa-6.6□□□□□ -3.47
snR38snR38 SPT6P23615 1451 aaKnown RBP-6.66□□□□□ -3.47
snR38snR38 MLP2P40457 1679 aa-6.76□□□□□ -3.49
snR38snR38 TOM7P53507 60 aa-6.82□□□□□ -3.5
snR38snR38 YFR010W-AP0C5N0 62 aa-6.99□□□□□ -3.53
snR38snR38 NCE101Q02820 53 aa-7.63□□□□□ -3.63
snR38snR38 Q0297Q9ZZV8 51 aa-8.09□□□□□ -3.7
snR38snR38 RPL39P04650 51 aa-8.17□□□□□ -3.72
snR38snR38 YIL046W-AQ3E7Z4 54 aa-8.92□□□□□ -3.84
snR38snR38 YDR034W-BQ6Q5X2 51 aa-10.17□□□□□ -4.04
Retrieved 63 of 5,963 RNA–protein pairs in 25 ms