RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W YHR073W-AP0C5N7 58 aa-0.9□□□□□ -2.55
VPS28YPL065W SSS1P35179 80 aa-0.91□□□□□ -2.56
VPS28YPL065W YOR316C-AQ3E806 69 aa-0.91□□□□□ -2.56
VPS28YPL065W YGR035W-AQ45U48 73 aa-0.91□□□□□ -2.56
VPS28YPL065W HUB1Q6Q546 73 aa-0.91□□□□□ -2.56
VPS28YPL065W PDR5P33302 1511 aaKnown RBP-0.91□□□□□ -2.56
VPS28YPL065W DOP1Q03921 1698 aa-0.91□□□□□ -2.56
VPS28YPL065W RPO31P04051 1460 aa-0.92□□□□□ -2.56
VPS28YPL065W YCF1P39109 1515 aaKnown RBP-0.92□□□□□ -2.56
VPS28YPL065W PAU7P39545 55 aa-0.92□□□□□ -2.56
VPS28YPL065W NUP188P52593 1655 aaKnown RBP-0.93□□□□□ -2.56
VPS28YPL065W YLR157W-DP0CE99 70 aa-0.93□□□□□ -2.56
VPS28YPL065W VMR1P38735 1592 aa-0.94□□□□□ -2.56
VPS28YPL065W IQG1Q12280 1495 aa-0.94□□□□□ -2.56
VPS28YPL065W TCB3Q03640 1545 aaKnown RBP-0.94□□□□□ -2.56
VPS28YPL065W YBT1P32386 1661 aa-0.95□□□□□ -2.56
VPS28YPL065W ERI1P62651 68 aaKnown RBP-0.96□□□□□ -2.56
VPS28YPL065W YJL133C-AQ3E7A3 74 aa-0.96□□□□□ -2.56
VPS28YPL065W IML1P47170 1584 aa-0.96□□□□□ -2.56
VPS28YPL065W CDC25P04821 1589 aa-0.97□□□□□ -2.56
VPS28YPL065W YOL131WQ08270 108 aa-0.98□□□□□ -2.57
VPS28YPL065W YOL166W-AQ8TGJ1 51 aa-0.98□□□□□ -2.57
VPS28YPL065W HIR3P47171 1648 aa-1□□□□□ -2.57
VPS28YPL065W YPR010C-AA5Z2X5 72 aa-1□□□□□ -2.57
VPS28YPL065W STU1P38198 1513 aa-1□□□□□ -2.57
VPS28YPL065W UFD4P33202 1483 aa-1.01□□□□□ -2.57
VPS28YPL065W BUD3P25558 1636 aa-1.02□□□□□ -2.57
VPS28YPL065W ATG2P53855 1592 aa-1.02□□□□□ -2.57
VPS28YPL065W YFL041W-AQ3E817 63 aa-1.02□□□□□ -2.57
VPS28YPL065W YSY6P38374 65 aa-1.03□□□□□ -2.57
VPS28YPL065W DDR2P89113 61 aa-1.03□□□□□ -2.57
VPS28YPL065W SCC2Q04002 1493 aa-1.04□□□□□ -2.58
VPS28YPL065W YLL066W-BQ8TGJ7 56 aa-1.04□□□□□ -2.58
VPS28YPL065W MYO4P32492 1471 aa-1.05□□□□□ -2.58
VPS28YPL065W USO1P25386 1790 aa-1.06□□□□□ -2.58
VPS28YPL065W COX9P07255 59 aa-1.06□□□□□ -2.58
VPS28YPL065W NUP192P47054 1683 aa-1.07□□□□□ -2.58
VPS28YPL065W NUP159P40477 1460 aa-1.07□□□□□ -2.58
VPS28YPL065W YIL102C-AQ2V2P5 75 aa-1.08□□□□□ -2.58
VPS28YPL065W YJL127C-BQ3E828 52 aa-1.08□□□□□ -2.58
VPS28YPL065W CHC1P22137 1653 aaKnown RBP-1.09□□□□□ -2.58
VPS28YPL065W YLR342W-AQ3E810 57 aa-1.09□□□□□ -2.58
VPS28YPL065W MON2P48563 1636 aaPredicted RBP-1.09□□□□□ -2.58
VPS28YPL065W PMP3P87284 55 aa-1.1□□□□□ -2.59
VPS28YPL065W SKI3P17883 1432 aaKnown RBP-1.1□□□□□ -2.59
VPS28YPL065W NUP170P38181 1502 aa-1.1□□□□□ -2.59
VPS28YPL065W YHR213W-AQ8TGT4 77 aa-1.11□□□□□ -2.59
VPS28YPL065W YKL023C-AQ2V2P3 75 aa-1.12□□□□□ -2.59
VPS28YPL065W PEP1P32319 1579 aa-1.13□□□□□ -2.59
VPS28YPL065W MLP2P40457 1679 aa-1.13□□□□□ -2.59
VPS28YPL065W PAI3P01094 68 aa-1.14□□□□□ -2.59
VPS28YPL065W RKR1Q04781 1562 aa-1.15□□□□□ -2.59
VPS28YPL065W HOR7Q05827 59 aa-1.16□□□□□ -2.6
VPS28YPL065W TOM7P53507 60 aa-1.17□□□□□ -2.6
VPS28YPL065W SMX2P40204 77 aaKnown RBP-1.18□□□□□ -2.6
VPS28YPL065W SPT6P23615 1451 aaKnown RBP-1.18□□□□□ -2.6
VPS28YPL065W VMA9Q3E7B6 73 aa-1.2□□□□□ -2.6
VPS28YPL065W YFR010W-AP0C5N0 62 aa-1.29□□□□□ -2.62
VPS28YPL065W NCE101Q02820 53 aa-1.33□□□□□ -2.62
VPS28YPL065W Q0297Q9ZZV8 51 aa-1.33□□□□□ -2.62
VPS28YPL065W RPL39P04650 51 aa-1.37□□□□□ -2.63
VPS28YPL065W YIL046W-AQ3E7Z4 54 aa-1.48□□□□□ -2.65
VPS28YPL065W YDR034W-BQ6Q5X2 51 aa-1.61□□□□□ -2.67
Retrieved 63 of 5,963 RNA–protein pairs in 50 ms