RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C SCC2Q04002 1493 aa-3.03□□□□□ -2.89
ATG16YMR159C CUP1-1P0CX80 61 aa-3.1□□□□□ -2.91
ATG16YMR159C CUP1-2P0CX81 61 aa-3.1□□□□□ -2.91
ATG16YMR159C YOR192C-CQ3E736 78 aa-3.14□□□□□ -2.91
ATG16YMR159C TY1B-DR4Q07793 1604 aa-3.15□□□□□ -2.91
ATG16YMR159C Q0017Q9ZZX8 53 aa-3.17□□□□□ -2.92
ATG16YMR159C YOR093CQ12275 1648 aa-3.18□□□□□ -2.92
ATG16YMR159C CSF1Q12150 2958 aa-3.2□□□□□ -2.92
ATG16YMR159C TCB3Q03640 1545 aaKnown RBP-3.22□□□□□ -2.92
ATG16YMR159C THO2P53552 1597 aaKnown RBP-3.25□□□□□ -2.93
ATG16YMR159C TRA1P38811 3744 aa-3.26□□□□□ -2.93
ATG16YMR159C MYO4P32492 1471 aa-3.28□□□□□ -2.93
ATG16YMR159C IRA1P18963 3092 aa-3.3□□□□□ -2.94
ATG16YMR159C IRA2P19158 3079 aa-3.4□□□□□ -2.95
ATG16YMR159C YOR316C-AQ3E806 69 aa-3.43□□□□□ -2.96
ATG16YMR159C YML054C-AQ3E809 52 aa-3.45□□□□□ -2.96
ATG16YMR159C YDR034C-AP0C289 58 aa-3.46□□□□□ -2.96
ATG16YMR159C YPR010C-AA5Z2X5 72 aa-3.47□□□□□ -2.96
ATG16YMR159C PDR5P33302 1511 aaKnown RBP-3.49□□□□□ -2.97
ATG16YMR159C RPL29P05747 59 aaPredicted RBP-3.53□□□□□ -2.97
ATG16YMR159C VMA9Q3E7B6 73 aa-3.61□□□□□ -2.99
ATG16YMR159C YCF1P39109 1515 aaKnown RBP-3.63□□□□□ -2.99
ATG16YMR159C FLO1P32768 1537 aa-3.65□□□□□ -2.99
ATG16YMR159C YBT1P32386 1661 aa-3.69□□□□□ -3
ATG16YMR159C YKL023C-AQ2V2P3 75 aa-3.8□□□□□ -3.02
ATG16YMR159C VPS13Q07878 3144 aa-3.82□□□□□ -3.02
ATG16YMR159C YMR105W-AQ8TGS8 64 aa-3.84□□□□□ -3.02
ATG16YMR159C NUP188P52593 1655 aaKnown RBP-3.9□□□□□ -3.03
ATG16YMR159C SSK2P53599 1579 aa-3.93□□□□□ -3.04
ATG16YMR159C YFR010W-AP0C5N0 62 aa-4□□□□□ -3.05
ATG16YMR159C BUD3P25558 1636 aa-4.06□□□□□ -3.06
ATG16YMR159C YHR073W-AP0C5N7 58 aa-4.12□□□□□ -3.07
ATG16YMR159C ATG2P53855 1592 aa-4.12□□□□□ -3.07
ATG16YMR159C YJL133C-AQ3E7A3 74 aa-4.13□□□□□ -3.07
ATG16YMR159C COX9P07255 59 aa-4.14□□□□□ -3.07
ATG16YMR159C DDR2P89113 61 aa-4.14□□□□□ -3.07
ATG16YMR159C STU1P38198 1513 aa-4.16□□□□□ -3.07
ATG16YMR159C GCN2P15442 1659 aa-4.16□□□□□ -3.08
ATG16YMR159C ULS1Q08562 1619 aa-4.17□□□□□ -3.08
ATG16YMR159C CDC25P04821 1589 aa-4.27□□□□□ -3.09
ATG16YMR159C NUP170P38181 1502 aa-4.34□□□□□ -3.1
ATG16YMR159C YLR342W-AQ3E810 57 aa-4.4□□□□□ -3.11
ATG16YMR159C NUP192P47054 1683 aa-4.41□□□□□ -3.11
ATG16YMR159C USO1P25386 1790 aa-4.47□□□□□ -3.12
ATG16YMR159C TOM1Q03280 3268 aa-4.51□□□□□ -3.13
ATG16YMR159C PEP1P32319 1579 aa-4.53□□□□□ -3.13
ATG16YMR159C SPT6P23615 1451 aaKnown RBP-4.57□□□□□ -3.14
ATG16YMR159C HIR3P47171 1648 aa-4.6□□□□□ -3.15
ATG16YMR159C YJL127C-BQ3E828 52 aa-4.78□□□□□ -3.17
ATG16YMR159C RKR1Q04781 1562 aa-4.84□□□□□ -3.18
ATG16YMR159C YLL066W-BQ8TGJ7 56 aa-4.85□□□□□ -3.19
ATG16YMR159C SMX2P40204 77 aaKnown RBP-5.01□□□□□ -3.21
ATG16YMR159C PMP3P87284 55 aa-5.02□□□□□ -3.21
ATG16YMR159C MON2P48563 1636 aaPredicted RBP-5.22□□□□□ -3.24
ATG16YMR159C CHC1P22137 1653 aaKnown RBP-5.29□□□□□ -3.26
ATG16YMR159C HOR7Q05827 59 aa-5.3□□□□□ -3.26
ATG16YMR159C TOM7P53507 60 aa-5.45□□□□□ -3.28
ATG16YMR159C MLP2P40457 1679 aa-5.47□□□□□ -3.28
ATG16YMR159C NCE101Q02820 53 aa-6.13□□□□□ -3.39
ATG16YMR159C Q0297Q9ZZV8 51 aa-6.38□□□□□ -3.43
ATG16YMR159C RPL39P04650 51 aa-6.44□□□□□ -3.44
ATG16YMR159C YIL046W-AQ3E7Z4 54 aa-6.99□□□□□ -3.53
ATG16YMR159C YDR034W-BQ6Q5X2 51 aa-7.83□□□□□ -3.66
Retrieved 63 of 5,963 RNA–protein pairs in 9.8 ms