RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 TSPY1Q01534 308 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 FMO1Q01740 532 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 MRPL58Q14197 206 aaKnown RBP9.93□□□□□ -0.82
PHGDH-228ENST00000641847 MTF1Q14872 753 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 GOLGA7BQ2TAP0 167 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 CTXN3Q4LDR2 81 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 PPM1LQ5SGD2 360 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 RAD9BQ6WBX8 426 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 ANKS3Q6ZW76 656 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 CEP68Q76N32 757 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 VPS36Q86VN1 386 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 ZNF677Q86XU0 584 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 PASD1Q8IV76 773 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 GLYCTKQ8IVS8 523 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 C12orf29Q8N999 325 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 LNX1Q8TBB1 728 aaPredicted RBP9.93□□□□□ -0.82
PHGDH-228ENST00000641847 TFAP2BQ92481 460 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 MYLPFQ96A32 169 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 TRIM44Q96DX7 344 aaPredicted RBP9.93□□□□□ -0.82
PHGDH-228ENST00000641847 CCDC42Q96M95 316 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 TMEM209Q96SK2 561 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 KXD1Q9BQD3 176 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 LPIN3Q9BQK8 851 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 ZSWIM1Q9BR11 485 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 ACBD6Q9BR61 282 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 SYT11Q9BT88 431 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.93□□□□□ -0.82
PHGDH-228ENST00000641847 ZCWPW1Q9H0M4 648 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 PDCL3Q9H2J4 239 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 CHRDQ9H2X0 955 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 CRTAC1Q9NQ79 661 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 CHST7Q9NS84 486 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 FNIP2Q9P278 1114 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 KIAA1257Q9ULG3 409 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.93□□□□□ -0.82
PHGDH-228ENST00000641847 GCN1Q92616 2671 aaKnown RBP9.92□□□□□ -0.82
PHGDH-228ENST00000641847 MIA3Q5JRA6 1907 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 MYBPHLA2RUH7 354 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 OR6C75A6NL08 312 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 M0QYV0 167 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 O00370 1275 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 AKR1B10O60218 316 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 ECI2O75521 394 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 MICAL2O94851 1124 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 OR4Q2P0C623 313 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 PTPN1P18031 435 aaKnown RBP9.92□□□□□ -0.82
PHGDH-228ENST00000641847 TNFAIP3P21580 790 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 CYLC1P35663 651 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-228ENST00000641847 CXCL12P48061 93 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 CYP27A1Q02318 531 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 GFPT1Q06210 699 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-228ENST00000641847 STILQ15468 1287 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 PSMD5Q16401 504 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 ASTE1Q2TB18 679 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-228ENST00000641847 ARHGAP17Q68EM7 881 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 PRSS55Q6UWB4 352 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-228ENST00000641847 CCDC170Q8IYT3 715 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 CRYBG2Q8N1P7 616 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 KDF1Q8NAX2 398 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-228ENST00000641847 MYCBPAPQ8TBZ2 947 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 SLC2A14Q8TDB8 520 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 ZNF606Q8WXB4 792 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 PIK3R5Q8WYR1 880 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 DNASE1L2Q92874 299 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 CYFIP2Q96F07 1278 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 PKMYT1Q99640 499 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 MED10Q9BTT4 135 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 OXCT2Q9BYC2 517 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-228ENST00000641847 SPTLC3Q9NUV7 552 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 MTRRQ9UBK8 725 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 TSPAN16Q9UKR8 245 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 NDRG2Q9UN36 371 aaKnown RBP9.92□□□□□ -0.82
PHGDH-228ENST00000641847 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.92□□□□□ -0.82
PHGDH-228ENST00000641847 BACE2Q9Y5Z0 518 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 IGF2RP11717 2491 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 C2orf16Q68DN1 1984 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 LOC400499M0QZD8 3231 aa9.92□□□□□ -0.82
PHGDH-228ENST00000641847 ATP8B3O60423 1300 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 FREM2Q5SZK8 3169 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 A0A087X0T9 212 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 FAM170AA1A519 330 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 DDX3XO00571 662 aaKnown RBP eCLIP9.91□□□□□ -0.82
PHGDH-228ENST00000641847 NDUFA10O95299 355 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 IPO7O95373 1038 aaKnown RBP9.91□□□□□ -0.82
PHGDH-228ENST00000641847 LSM8O95777 96 aaKnown RBP9.91□□□□□ -0.82
PHGDH-228ENST00000641847 FAM228BP0C875 321 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 CPB1P15086 417 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 RPL17P18621 184 aaKnown RBP9.91□□□□□ -0.82
PHGDH-228ENST00000641847 ADORA2BP29275 332 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 HOXA9P31269 272 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 ARPP19P56211 112 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 MAPRE1Q15691 268 aaKnown RBP9.91□□□□□ -0.82
PHGDH-228ENST00000641847 CNGA2Q16280 664 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 SLC18A3Q16572 532 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 CLEC16AQ2KHT3 1053 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 SLC39A12Q504Y0 691 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 PPP1R26Q5T8A7 1209 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-228ENST00000641847 NAA35Q5VZE5 725 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 DENND1BQ6P3S1 775 aa9.91□□□□□ -0.82
PHGDH-228ENST00000641847 FAM171BQ6P995 826 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms