RNA–Protein interactions for RNA: ENST00000638454.1

PRAMEF13-202, Transcript of PRAME family member 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRAMEF13, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF13-202ENST00000638454 RUBCNQ92622 972 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 TRIM43Q96BQ3 446 aaPredicted RBP11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 TMEM169Q96HH4 297 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 BTBD6Q96KE9 485 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 RNPC3Q96LT9 517 aaKnown RBP11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 TTPALQ9BTX7 342 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 B3GNT5Q9BYG0 378 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 CNGB3Q9NQW8 809 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 RRN3Q9NYV6 651 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 CYTH4Q9UIA0 394 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 NME7Q9Y5B8 376 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 PCDHB5Q9Y5E4 795 aa11.12□□□□□ -0.63
PRAMEF13-202ENST00000638454 MYBPHLA2RUH7 354 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 KRIT1O00522 736 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 ZNF185O15231 689 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 DDX3YO15523 660 aaKnown RBP11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 PRPSAP2O60256 369 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 ATP2C2O75185 946 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 ZRANB2O95218 330 aaKnown RBP eCLIP11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 ITGB1P05556 798 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 CPB1P15086 417 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 FGFR3P22607 806 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 TKTP29401 623 aaKnown RBP11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 RFC1P35251 1148 aaPredicted RBP11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 PCK1P35558 622 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 RNASE9P60153 205 aaKnown RBP11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 COPS2P61201 443 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 RPL7AP62424 266 aaKnown RBP11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 CREMQ03060 361 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 ADIGQ0VDE8 80 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 NAA30Q147X3 362 aaPredicted RBP11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 PTPROQ16827 1216 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 OLFML1Q6UWY5 402 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 CD300LGQ6UXG3 332 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 KATNAL2Q8IYT4 538 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 RCOR2Q8IZ40 523 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 SPATA4Q8NEY3 305 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 EXD1Q8NHP7 514 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 IRGQQ8WZA9 623 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 CD101Q93033 1021 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 FAM149B1Q96BN6 582 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 LBHD1Q9BQE6 289 aaPredicted RBP11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 ZCWPW1Q9H0M4 648 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 HOMER3Q9NSC5 361 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 EHD2Q9NZN4 543 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 SSX2IPQ9Y2D8 614 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 PCDHB12Q9Y5F1 795 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 TET1Q8NFU7 2136 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 PCNTO95613 3336 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 TSC2P49815 1807 aa11.11□□□□□ -0.63
PRAMEF13-202ENST00000638454 C2CD4BA6NLJ0 364 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 GOLGA8CPA6NN73 597 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 CLDN5O00501 218 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 CAPN9O14815 690 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 PAPSS1O43252 624 aaPredicted RBP11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 HRO43593 1189 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 HCRTO43612 131 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 FGGP02679 453 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 EN2P19622 333 aaPredicted RBP11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 GRIK1P39086 918 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 MAGEA11P43364 429 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 PTPN9P43378 593 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 GATMP50440 423 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 TKTL1P51854 596 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 MRPS5P82675 430 aaKnown RBP11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 KRT17Q04695 432 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 SLC39A12Q504Y0 691 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 C4orf48Q5BLP8 95 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 C8orf74Q6P047 294 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 MAP7D3Q8IWC1 876 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 SCML4Q8N228 414 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 MMGT1Q8N4V1 131 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 CCDC26Q8TAB7 109 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 SPPL2BQ8TCT7 592 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 FOXJ1Q92949 421 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 IGSF21Q96ID5 467 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 SLC9A7Q96T83 725 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 TBCBQ99426 244 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 FBXO44Q9H4M3 255 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 CSNK1G1Q9HCP0 422 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 MARCH5Q9NX47 278 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 SPG21Q9NZD8 308 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 LTBP2Q14767 1821 aa11.1□□□□□ -0.63
PRAMEF13-202ENST00000638454 TARSL2A2RTX5 802 aaKnown RBP11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 ERLIN1O75477 346 aa11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 DAB1O75553 588 aa11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 ZBED1O96006 694 aa11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 KRT1P04264 644 aa11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 URODP06132 367 aa11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 BDNFP23560 247 aa11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 GJC1P36383 396 aa11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 PEX5P50542 639 aa11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 RPL10AP62906 217 aaKnown RBP11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 YWHAZP63104 245 aaKnown RBP11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 AGERQ15109 404 aa11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 TCTN1Q2MV58 587 aa11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 BOLA3Q53S33 107 aa11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 KIAA0319Q5VV43 1072 aa11.09□□□□□ -0.63
PRAMEF13-202ENST00000638454 LLGL2Q6P1M3 1020 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms