RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 RPL7AP62424 266 aaKnown RBP8.42□□□□□ -1.06
CPNE3-209ENST00000620393 ETF1P62495 437 aaKnown RBP8.42□□□□□ -1.06
CPNE3-209ENST00000620393 YWHAZP63104 245 aaKnown RBP8.42□□□□□ -1.06
CPNE3-209ENST00000620393 TAF5Q15542 800 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 ZNF569Q5MCW4 686 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 FAM102AQ5T9C2 384 aaPredicted RBP8.42□□□□□ -1.06
CPNE3-209ENST00000620393 SPATA31D4Q6ZUB0 917 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 CCDC149Q6ZUS6 474 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 DENND5BQ6ZUT9 1274 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 SLC26A9Q7LBE3 791 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 SLFN11Q7Z7L1 901 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 MON1AQ86VX9 555 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 KREMEN2Q8NCW0 462 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 TRIM58Q8NG06 486 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 JOSD2Q8TAC2 188 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 FNIP1Q8TF40 1166 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 GIPC2Q8TF65 315 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 CLEC4CQ8WTT0 213 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 SLC22A17Q8WUG5 538 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 HDAC7Q8WUI4 952 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 TTLL2Q9BWV7 592 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 PLEKHA4Q9H4M7 779 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 ZNF576Q9H609 170 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 EHD2Q9NZN4 543 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 IP6K2Q9UHH9 426 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 LCMT1Q9UIC8 334 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 FBXW11Q9UKB1 542 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 SCML2Q9UQR0 700 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 CEP290O15078 2479 aa8.42□□□□□ -1.06
CPNE3-209ENST00000620393 PTPRSQ13332 1948 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 C2CD4BA6NLJ0 364 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 YJEFN3A6XGL0 299 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 E7ENQ6 273 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 KIF2AO00139 706 aaPredicted RBP8.41□□□□□ -1.06
CPNE3-209ENST00000620393 PER2O15055 1255 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 BUB1BO60566 1050 aaPredicted RBP8.41□□□□□ -1.06
CPNE3-209ENST00000620393 HSF2BPO75031 334 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 PALMO75781 387 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 GRAP2O75791 330 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 PROSCO94903 275 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 CSPG5O95196 566 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 FYNP06241 537 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 CSH1P0DML2 217 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 CSH2P0DML3 217 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 PDGFRAP16234 1089 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 HMGA1P17096 107 aaKnown RBP8.41□□□□□ -1.06
CPNE3-209ENST00000620393 ATF6P18850 670 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 SLC1A1P43005 524 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 EPHB3P54753 998 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 USP46P62068 366 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 OGDHQ02218 1023 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 TWF1Q12792 350 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 PLD1Q13393 1074 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 CAMK2BQ13554 666 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 PIGHQ14442 188 aaPredicted RBP8.41□□□□□ -1.06
CPNE3-209ENST00000620393 MESDQ14696 234 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 ACAP1Q15027 740 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 PTPROQ16827 1216 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 BSPRYQ5W0U4 402 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 BEND5Q7L4P6 421 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 BHLHA9Q7RTU4 235 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 DNAJB7Q7Z6W7 309 aaPredicted RBP8.41□□□□□ -1.06
CPNE3-209ENST00000620393 SYCE1Q8N0S2 351 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 SLC35F6Q8N357 371 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 ARHGAP18Q8N392 663 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 LRRC57Q8N9N7 239 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 GPR152Q8TDT2 470 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 RXFP2Q8WXD0 754 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 MRPL38Q96DV4 380 aaKnown RBP8.41□□□□□ -1.06
CPNE3-209ENST00000620393 PIWIL1Q96J94 861 aaKnown RBP8.41□□□□□ -1.06
CPNE3-209ENST00000620393 BTBD6Q96KE9 485 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 MYRFLQ96LU7 910 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 MCEEQ96PE7 176 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 ALS2CR12Q96Q35 445 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 DDX23Q9BUQ8 820 aaKnown RBP8.41□□□□□ -1.06
CPNE3-209ENST00000620393 TRIM7Q9C029 511 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 TLE6Q9H808 572 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 METTL5Q9NRN9 209 aaKnown RBP8.41□□□□□ -1.06
CPNE3-209ENST00000620393 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.41□□□□□ -1.06
CPNE3-209ENST00000620393 ANAPC7Q9UJX3 599 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 YIPF1Q9Y548 306 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 ASB3Q9Y575 518 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 INSL5Q9Y5Q6 135 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 ALG6Q9Y672 507 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 CAPN6Q9Y6Q1 641 aa8.41□□□□□ -1.06
CPNE3-209ENST00000620393 DPYSL4O14531 572 aa8.4□□□□□ -1.06
CPNE3-209ENST00000620393 HRO43593 1189 aa8.4□□□□□ -1.06
CPNE3-209ENST00000620393 ZMYND10O75800 440 aa8.4□□□□□ -1.06
CPNE3-209ENST00000620393 LTFP02788 710 aa8.4□□□□□ -1.06
CPNE3-209ENST00000620393 C8AP07357 584 aa8.4□□□□□ -1.06
CPNE3-209ENST00000620393 ZDHHC11BP0C7U3 371 aa8.4□□□□□ -1.06
CPNE3-209ENST00000620393 TNNT1P13805 278 aa8.4□□□□□ -1.06
CPNE3-209ENST00000620393 GPD1P21695 349 aa8.4□□□□□ -1.06
CPNE3-209ENST00000620393 MAN1A1P33908 653 aa8.4□□□□□ -1.06
CPNE3-209ENST00000620393 NOS2P35228 1153 aa8.4□□□□□ -1.06
CPNE3-209ENST00000620393 FLT3P36888 993 aa8.4□□□□□ -1.06
CPNE3-209ENST00000620393 MATKP42679 507 aa8.4□□□□□ -1.06
CPNE3-209ENST00000620393 ZNF143P52747 638 aaPredicted RBP8.4□□□□□ -1.06
CPNE3-209ENST00000620393 YWHAGP61981 247 aaKnown RBP eCLIP8.4□□□□□ -1.06
CPNE3-209ENST00000620393 TAF10Q12962 218 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms