RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 BHLHA9Q7RTU4 235 aa12.83□□□□□ -0.36
LIG1-217ENST00000599165 C12orf40Q86WS4 652 aa12.83□□□□□ -0.36
LIG1-217ENST00000599165 IRF2BP1Q8IU81 584 aa12.83□□□□□ -0.36
LIG1-217ENST00000599165 SFTPA1Q8IWL2 248 aa12.83□□□□□ -0.36
LIG1-217ENST00000599165 ADGRG2Q8IZP9 1017 aa12.83□□□□□ -0.36
LIG1-217ENST00000599165 CPA6Q8N4T0 437 aa12.83□□□□□ -0.36
LIG1-217ENST00000599165 KIAA1958Q8N8K9 716 aa12.83□□□□□ -0.36
LIG1-217ENST00000599165 TRIML1Q8N9V2 468 aa12.83□□□□□ -0.36
LIG1-217ENST00000599165 CCDC150Q8NCX0 1101 aa12.83□□□□□ -0.36
LIG1-217ENST00000599165 ATP2A3Q93084 1043 aa12.83□□□□□ -0.36
LIG1-217ENST00000599165 P2RY11Q96G91 374 aa12.83□□□□□ -0.36
LIG1-217ENST00000599165 FAM124BQ9H5Z6 455 aaPredicted RBP12.83□□□□□ -0.36
LIG1-217ENST00000599165 CYLDQ9NQC7 956 aa12.83□□□□□ -0.36
LIG1-217ENST00000599165 ZSCAN32Q9NX65 697 aa12.83□□□□□ -0.36
LIG1-217ENST00000599165 PCDHGA2Q9Y5H1 932 aa12.83□□□□□ -0.36
LIG1-217ENST00000599165 SDK1Q7Z5N4 2213 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 A0A1W2PQH9 124 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 RNF225M0QZC1 329 aaPredicted RBP12.82□□□□□ -0.36
LIG1-217ENST00000599165 MDM4O15151 490 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 TLR5O60602 858 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 GABBR2O75899 941 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 CALCAP01258 141 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 CXCL12P48061 93 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 CCR3P51677 355 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 DHCR24Q15392 516 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 PKDCCQ504Y2 493 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 RAB41Q5JT25 222 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 RHBDF2Q6PJF5 856 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 PIGZQ86VD9 579 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 ARHGEF19Q8IW93 802 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 SYNPOQ8N3V7 929 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 TFAP2BQ92481 460 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 HEXIM2Q96MH2 286 aaKnown RBP12.82□□□□□ -0.36
LIG1-217ENST00000599165 P2RY13Q9BPV8 354 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 KLF16Q9BXK1 252 aaPredicted RBP12.82□□□□□ -0.36
LIG1-217ENST00000599165 SEMA4AQ9H3S1 761 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 CLSTN2Q9H4D0 955 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 FBXO44Q9H4M3 255 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 NUDT5Q9UKK9 219 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 DCHS1Q96JQ0 3298 aa12.82□□□□□ -0.36
LIG1-217ENST00000599165 BICDL2A1A5D9 508 aa12.81□□□□□ -0.36
LIG1-217ENST00000599165 O00370 1275 aa12.81□□□□□ -0.36
LIG1-217ENST00000599165 RNF40O75150 1001 aa12.81□□□□□ -0.36
LIG1-217ENST00000599165 LMNAP02545 664 aaKnown RBP12.81□□□□□ -0.36
LIG1-217ENST00000599165 SLC6A11P48066 632 aa12.81□□□□□ -0.36
LIG1-217ENST00000599165 GRSF1Q12849 480 aaKnown RBP eCLIP12.81□□□□□ -0.36
LIG1-217ENST00000599165 CCDC40Q4G0X9 1142 aa12.81□□□□□ -0.36
LIG1-217ENST00000599165 CCDC186Q7Z3E2 898 aa12.81□□□□□ -0.36
LIG1-217ENST00000599165 BBS7Q8IWZ6 715 aa12.81□□□□□ -0.36
LIG1-217ENST00000599165 PHTF2Q8N3S3 785 aa12.81□□□□□ -0.36
LIG1-217ENST00000599165 TTC39CQ8N584 583 aa12.81□□□□□ -0.36
LIG1-217ENST00000599165 ANKRD52Q8NB46 1076 aa12.81□□□□□ -0.36
LIG1-217ENST00000599165 CD101Q93033 1021 aa12.81□□□□□ -0.36
LIG1-217ENST00000599165 KREMEN1Q96MU8 473 aa12.81□□□□□ -0.36
LIG1-217ENST00000599165 SRRTQ9BXP5 876 aaKnown RBP12.81□□□□□ -0.36
LIG1-217ENST00000599165 EPC1Q9H2F5 836 aa12.81□□□□□ -0.36
LIG1-217ENST00000599165 TLR8Q9NR97 1041 aaKnown RBP12.81□□□□□ -0.36
LIG1-217ENST00000599165 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.81□□□□□ -0.36
LIG1-217ENST00000599165 TSPAN16Q9UKR8 245 aa12.81□□□□□ -0.36
LIG1-217ENST00000599165 FRYLO94915 3013 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 E2F8A0AVK6 867 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 CHURC1-FNTBB4DL54 471 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 K7EQS6 105 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 P4HA2O15460 535 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 NFATC1O95644 943 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 DRD1P21728 446 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 FNTBP49356 437 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 ZNF132P52740 706 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 PDE4CQ08493 712 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 KCNH2Q12809 1159 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 SRSF5Q13243 272 aaKnown RBP12.8□□□□□ -0.36
LIG1-217ENST00000599165 GOLGA7BQ2TAP0 167 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 ZC3H14Q6PJT7 736 aaKnown RBP12.8□□□□□ -0.36
LIG1-217ENST00000599165 DCLK2Q8N568 766 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 NDRG1Q92597 394 aaKnown RBP12.8□□□□□ -0.36
LIG1-217ENST00000599165 NT5C1BQ96P26 610 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 FAM126AQ9BYI3 521 aaPredicted RBP12.8□□□□□ -0.36
LIG1-217ENST00000599165 UBXN6Q9BZV1 441 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 LMBRD1Q9NUN5 540 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 RWDD2AQ9UIY3 292 aa12.8□□□□□ -0.36
LIG1-217ENST00000599165 HRO43593 1189 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 IRF1P10914 325 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 RARGP13631 454 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 TBXAS1P24557 533 aaPredicted RBP12.79□□□□□ -0.36
LIG1-217ENST00000599165 HOXA6P31267 233 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 DPCR1Q3MIW9 517 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 LY6G5CQ5SRR4 150 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 PM20D1Q6GTS8 502 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 KLHDC10Q6PID8 442 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 Q6ZNB5 142 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 RRAGAQ7L523 313 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 DDX42Q86XP3 938 aaKnown RBP eCLIP12.79□□□□□ -0.36
LIG1-217ENST00000599165 ETFBKMTQ8IXQ9 262 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 ZNF276Q8N554 614 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 EHBP1Q8NDI1 1231 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 HCN2Q9UL51 889 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 CNTN6Q9UQ52 1028 aa12.79□□□□□ -0.36
LIG1-217ENST00000599165 SLC9A3R1O14745 358 aaPredicted RBP12.78□□□□□ -0.36
LIG1-217ENST00000599165 XPO1O14980 1071 aaKnown RBP12.78□□□□□ -0.36
LIG1-217ENST00000599165 GNA14O95837 355 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms