RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 TTC7AQ9ULT0 858 aaPredicted RBP18.25■□□□□ 0.51
CXXC1-212ENST00000589940 SSX2IPQ9Y2D8 614 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 RANBP2P49792 3224 aaKnown RBP18.25■□□□□ 0.51
CXXC1-212ENST00000589940 PGRMC1O00264 195 aaKnown RBP18.25■□□□□ 0.51
CXXC1-212ENST00000589940 ABLIM3O94929 683 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 LTFP02788 710 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 PYGMP11217 842 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 MIPP30301 263 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 CDO1Q16878 200 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 SDHAF4Q5VUM1 108 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 FAM172AQ8WUF8 416 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 AUTS2Q8WXX7 1259 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 RPGRIP1Q96KN7 1286 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 SPATA17Q96L03 361 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 NCAPGQ9BPX3 1015 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 PLVAPQ9BX97 442 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 FNIP2Q9P278 1114 aa18.25■□□□□ 0.51
CXXC1-212ENST00000589940 LILRB3O75022 631 aa18.24■□□□□ 0.51
CXXC1-212ENST00000589940 KRT7P08729 469 aa18.24■□□□□ 0.51
CXXC1-212ENST00000589940 NOS2P35228 1153 aa18.24■□□□□ 0.51
CXXC1-212ENST00000589940 GJC1P36383 396 aa18.24■□□□□ 0.51
CXXC1-212ENST00000589940 RPL10AP62906 217 aaKnown RBP18.24■□□□□ 0.51
CXXC1-212ENST00000589940 RAB33AQ14088 237 aa18.24■□□□□ 0.51
CXXC1-212ENST00000589940 SHHQ15465 462 aa18.24■□□□□ 0.51
CXXC1-212ENST00000589940 SLC25A52Q3SY17 297 aa18.24■□□□□ 0.51
CXXC1-212ENST00000589940 DCAF6Q58WW2 860 aa18.24■□□□□ 0.51
CXXC1-212ENST00000589940 SEL1L2Q5TEA6 688 aa18.24■□□□□ 0.51
CXXC1-212ENST00000589940 CENPIQ92674 756 aaPredicted RBP18.24■□□□□ 0.51
CXXC1-212ENST00000589940 GOLGA1Q92805 767 aa18.24■□□□□ 0.51
CXXC1-212ENST00000589940 FBXO44Q9H4M3 255 aa18.24■□□□□ 0.51
CXXC1-212ENST00000589940 NGRNQ9NPE2 291 aaKnown RBP18.24■□□□□ 0.51
CXXC1-212ENST00000589940 HSFX1Q9UBD0 423 aa18.24■□□□□ 0.51
CXXC1-212ENST00000589940 LZTS1Q9Y250 596 aa18.24■□□□□ 0.51
CXXC1-212ENST00000589940 SOAT2O75908 522 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 FYNP06241 537 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 ATF2P15336 505 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 TUFMP49411 452 aaKnown RBP18.23■□□□□ 0.51
CXXC1-212ENST00000589940 IFRD2Q12894 506 aaPredicted RBP18.23■□□□□ 0.51
CXXC1-212ENST00000589940 DENND5BQ6ZUT9 1274 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 NT5C3BQ969T7 300 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 TRIM62Q9BVG3 475 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 RXFP1Q9HBX9 757 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 STAP1Q9ULZ2 295 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 USP18Q9UMW8 372 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 CAPN9O14815 690 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 TADA3O75528 432 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 IL1R2P27930 398 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 TERF1P54274 439 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 CLUL1Q15846 466 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 TXNRD3NBQ6F5E7 133 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 STRADAQ7RTN6 431 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 EXD1Q8NHP7 514 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 CEP295NLQ96MC4 621 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 DDX56Q9NY93 547 aaKnown RBP18.23■□□□□ 0.51
CXXC1-212ENST00000589940 IL37Q9NZH6 218 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 SCML2Q9UQR0 700 aa18.23■□□□□ 0.51
CXXC1-212ENST00000589940 EFCAB8A8MWE9 144 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 ZRANB2O95218 330 aaKnown RBP eCLIP18.22■□□□□ 0.513e-6■■■■□ 25.5
CXXC1-212ENST00000589940 FGGP02679 453 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 TFE3P19532 575 aaPredicted RBP18.22■□□□□ 0.51
CXXC1-212ENST00000589940 HDAC4P56524 1084 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 ITIH3Q06033 890 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 RAB6CQ53S08 254 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 SYPL2Q5VXT5 272 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 BSPRYQ5W0U4 402 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 FAM109BQ6ICB4 259 aaPredicted RBP18.22■□□□□ 0.51
CXXC1-212ENST00000589940 AADACL2Q6P093 401 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 BEND5Q7L4P6 421 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 TBCBQ99426 244 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 NAP1L3Q99457 506 aaPredicted RBP18.22■□□□□ 0.51
CXXC1-212ENST00000589940 NPY6RQ99463 290 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 ADAM33Q9BZ11 813 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 RAB6CQ9H0N0 254 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 PCSK1NQ9UHG2 260 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 NAALADL1Q9UQQ1 740 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 CHD9Q3L8U1 2897 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 GRXCR1A8MXD5 290 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 TEX28O15482 410 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 PRPSAP2O60256 369 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 RTN3O95197 1032 aaPredicted RBP18.22■□□□□ 0.51
CXXC1-212ENST00000589940 TRUB2O95900 331 aaKnown RBP18.22■□□□□ 0.51
CXXC1-212ENST00000589940 NCAM1P13591 858 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 MYOGP15173 224 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 SULT1E1P49888 294 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 ATP13A4Q4VNC1 1196 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 TMC7Q7Z402 723 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 STKLD1Q8NE28 680 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 SPATA4Q8NEY3 305 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 GPR152Q8TDT2 470 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 C17orf80Q9BSJ5 609 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 ZWILCHQ9H900 591 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 RRN3Q9NYV6 651 aa18.22■□□□□ 0.51
CXXC1-212ENST00000589940 FAM92AA1XBS5 289 aa18.21■□□□□ 0.51
CXXC1-212ENST00000589940 C5orf67F2Z3F1 127 aa18.21■□□□□ 0.51
CXXC1-212ENST00000589940 ATF6P18850 670 aa18.21■□□□□ 0.51
CXXC1-212ENST00000589940 GTF2F1P35269 517 aaKnown RBP eCLIP18.21■□□□□ 0.51
CXXC1-212ENST00000589940 YWHAGP61981 247 aaKnown RBP eCLIP18.21■□□□□ 0.51
CXXC1-212ENST00000589940 USP46P62068 366 aa18.21■□□□□ 0.51
CXXC1-212ENST00000589940 ZFYVE27Q5T4F4 411 aa18.21■□□□□ 0.51
CXXC1-212ENST00000589940 BNIPLQ7Z465 357 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms