RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 TMEM270Q6UE05 265 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 ARHGEF19Q8IW93 802 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 TRIM59Q8IWR1 403 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 MLKLQ8NB16 471 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 EHBP1Q8NDI1 1231 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 ATRIPQ8WXE1 791 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 OVCA2Q8WZ82 227 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 NDRG1Q92597 394 aaKnown RBP9.33□□□□□ -0.92
SDF2-207ENST00000588472 WBP2Q969T9 261 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 FAXDC2Q96IV6 333 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 CNOT6LQ96LI5 555 aaKnown RBP9.33□□□□□ -0.92
SDF2-207ENST00000588472 CNTNAP3BQ96NU0 1288 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 P2RY13Q9BPV8 354 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 CRACR2AQ9BSW2 395 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 CNTNAP3Q9BZ76 1288 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 INTS2Q9H0H0 1204 aaKnown RBP9.33□□□□□ -0.92
SDF2-207ENST00000588472 LMBRD1Q9NUN5 540 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 COMMD8Q9NX08 183 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 DLL3Q9NYJ7 618 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 IL37Q9NZH6 218 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 SCML2Q9UQR0 700 aa9.33□□□□□ -0.92
SDF2-207ENST00000588472 FAM186AA6NE01 2351 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 RNF225M0QZC1 329 aaPredicted RBP9.32□□□□□ -0.92
SDF2-207ENST00000588472 TULP2O00295 520 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 SLC9A3R1O14745 358 aaPredicted RBP9.32□□□□□ -0.92
SDF2-207ENST00000588472 HMBSP08397 361 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 SDHBP21912 280 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 ATP5C1P36542 298 aaKnown RBP9.32□□□□□ -0.92
SDF2-207ENST00000588472 CXCL12P48061 93 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 CCR3P51677 355 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 KIF11P52732 1056 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 SEC13P55735 322 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 PDE4CQ08493 712 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 PPP2R5DQ14738 602 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 ANO4Q32M45 955 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 DPCR1Q3MIW9 517 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 TMEM196Q5HYL7 178 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 PKN3Q6P5Z2 889 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 PIGZQ86VD9 579 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 TTC30AQ86WT1 665 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 DDX42Q86XP3 938 aaKnown RBP eCLIP9.32□□□□□ -0.92
SDF2-207ENST00000588472 MIB1Q86YT6 1006 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 NAT16Q8N8M0 369 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 ANKRD52Q8NB46 1076 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 CD101Q93033 1021 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 GBP4Q96PP9 640 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 MED15Q96RN5 788 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 UBE2TQ9NPD8 197 aaPredicted RBP9.32□□□□□ -0.92
SDF2-207ENST00000588472 POLR3BQ9NW08 1133 aaPredicted RBP9.32□□□□□ -0.92
SDF2-207ENST00000588472 C2orf42Q9NWW7 574 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 OSER1Q9NX31 292 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 HESX1Q9UBX0 185 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 TSPAN16Q9UKR8 245 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 FBXO4Q9UKT5 387 aa9.32□□□□□ -0.92
SDF2-207ENST00000588472 F5P12259 2224 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 CACNA1IQ9P0X4 2223 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 FAM92AA1XBS5 289 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 CHURC1-FNTBB4DL54 471 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 PES1O00541 588 aaKnown RBP9.31□□□□□ -0.92
SDF2-207ENST00000588472 TRDMT1O14717 391 aaKnown RBP9.31□□□□□ -0.92
SDF2-207ENST00000588472 RNF40O75150 1001 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 OLFM2O95897 454 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 CYP17A1P05093 508 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 ZDHHC11BP0C7U3 371 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 RALAP11233 206 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 VDRP11473 427 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 LCP1P13796 627 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 TCF3P15923 654 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 BRD2P25440 801 aaKnown RBP9.31□□□□□ -0.92
SDF2-207ENST00000588472 USP8P40818 1118 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 SLC6A11P48066 632 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 PXNP49023 591 aaPredicted RBP9.31□□□□□ -0.92
SDF2-207ENST00000588472 FNTBP49356 437 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 RGS7P49802 495 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 TKTL1P51854 596 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 APBA1Q02410 837 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 GOLGA8FQ08AF8 430 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 DMWDQ09019 674 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 GOLGA8DPQ0D2H9 430 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 EFEMP1Q12805 493 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 CCINQ13939 588 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 DHCR24Q15392 516 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 LPAL2Q16609 132 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 ARHGAP44Q17R89 818 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 RSPO4Q2I0M5 234 aaPredicted RBP9.31□□□□□ -0.92
SDF2-207ENST00000588472 SNX30Q5VWJ9 437 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 ARHGAP17Q68EM7 881 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 GJB7Q6PEY0 223 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 FOXR2Q6PJQ5 311 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 RSRC2Q7L4I2 434 aaKnown RBP9.31□□□□□ -0.92
SDF2-207ENST00000588472 SCD5Q86SK9 330 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 BBS7Q8IWZ6 715 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 ADGRG2Q8IZP9 1017 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 SPEM1Q8N4L4 309 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 RBBP8NLQ8NC74 664 aaPredicted RBP9.31□□□□□ -0.92
SDF2-207ENST00000588472 LMO3Q8TAP4 145 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 TFAP2BQ92481 460 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 BHMTQ93088 406 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 EXOC4Q96A65 974 aa9.31□□□□□ -0.92
SDF2-207ENST00000588472 ZFRQ96KR1 1074 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms