RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 EPS15L1Q9UBC2 864 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 NAGPAQ9UK23 515 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 MAGED2Q9UNF1 606 aaPredicted RBP9.78□□□□□ -0.84
UBBP4-201ENST00000583708 PAXBP1Q9Y5B6 917 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 BRWD1Q9NSI6 2320 aa9.78□□□□□ -0.84
UBBP4-201ENST00000583708 CDH23Q9H251 3354 aa9.77□□□□□ -0.84
UBBP4-201ENST00000583708 TRAV19A0A0A6YYK7 116 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 ANKRD62A6NC57 917 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 SIGLEC16A6NMB1 481 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 E5RJQ4 531 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 H3BQ06 376 aaPredicted RBP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 DDX3XO00571 662 aaKnown RBP eCLIP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 PAPSS1O43252 624 aaPredicted RBP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 SOAT2O75908 522 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 LCA5LO95447 670 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 OLFM2O95897 454 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 F9P00740 461 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 LTFP02788 710 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 FTLP02792 175 aaPredicted RBP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 ERBB2P04626 1255 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 SKILP12757 684 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 HDCP19113 662 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 NOS2P35228 1153 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 ATP5C1P36542 298 aaKnown RBP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 EIF4A3P38919 411 aaKnown RBP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 GPR15P49685 360 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 YWHAGP61981 247 aaKnown RBP eCLIP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 USP46P62068 366 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 KRT83P78385 493 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 SLC7A9P82251 487 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 RBM10P98175 930 aaKnown RBP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 GOLGA8FQ08AF8 430 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 GOLGA8DPQ0D2H9 430 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 ADIGQ0VDE8 80 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 MTMR3Q13615 1198 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 SPA17Q15506 151 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 PTPN21Q16825 1174 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 NAA35Q5VZE5 725 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 BSPRYQ5W0U4 402 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 BTBD8Q5XKL5 378 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 E4F1Q66K89 784 aaPredicted RBP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 MSANTD2Q6P1R3 559 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 SCUBE3Q8IX30 993 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 MCOLN2Q8IZK6 566 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 C3orf20Q8ND61 904 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 SHKBP1Q8TBC3 707 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 RNF139Q8WU17 664 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 FGF13Q92913 245 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 PDLIM2Q96JY6 352 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 CPXM1Q96SM3 734 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 PCDHB18PQ96TA0 734 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 BAG1Q99933 345 aaPredicted RBP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 POPDC2Q9HBU9 364 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 ZNF334Q9HCZ1 680 aaPredicted RBP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 SEPT11Q9NVA2 429 aaKnown RBP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 IGSF9Q9P2J2 1179 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 CHORDC1Q9UHD1 332 aaPredicted RBP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 DNMT3LQ9UJW3 386 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 HBS1LQ9Y450 684 aaKnown RBP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 EPN1Q9Y6I3 576 aaPredicted RBP9.77□□□□□ -0.85
UBBP4-201ENST00000583708 SCINQ9Y6U3 715 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 PTPRDP23468 1912 aa9.77□□□□□ -0.85
UBBP4-201ENST00000583708 A0A1W2PRU2 124 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 EIF3CLB5ME19 914 aaKnown RBP9.76□□□□□ -0.85
UBBP4-201ENST00000583708 TULP2O00295 520 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 TLR5O60602 858 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 MOSPD3O75425 235 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 ECI2O75521 394 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 OAS1P00973 400 aaKnown RBP9.76□□□□□ -0.85
UBBP4-201ENST00000583708 CFHP08603 1231 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 H2AFZP0C0S5 128 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 SLC2A3P11169 496 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 LAMP2P13473 410 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 LCP1P13796 627 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 GBP1P32455 592 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 AVPR1AP37288 418 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 RGS7P49802 495 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 GPC5P78333 572 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 PTP4A2Q12974 167 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 ACAP1Q15027 740 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 TCEAL1Q15170 157 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 PTPN20Q4JDL3 420 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 CCDC122Q5T0U0 273 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 SDHAF4Q5VUM1 108 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 OR6B2Q6IFH4 312 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 OLFML1Q6UWY5 402 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 H2AFVQ71UI9 128 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 MON1BQ7L1V2 547 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 TMEM150AQ86TG1 271 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 XYLT1Q86Y38 959 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 PASD1Q8IV76 773 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 ADHFE1Q8IWW8 467 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 HS6ST3Q8IZP7 471 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 CMTM8Q8IZV2 173 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 CELF5Q8N6W0 485 aaKnown RBP9.76□□□□□ -0.85
UBBP4-201ENST00000583708 GPR152Q8TDT2 470 aa9.76□□□□□ -0.85
UBBP4-201ENST00000583708 CPA5Q8WXQ8 436 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms