RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 FBXO4Q9UKT5 387 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 L1RE1Q9UN81 338 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 NME7Q9Y5B8 376 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 PCDHGA2Q9Y5H1 932 aa12.58□□□□□ -0.4
GGA3-217ENST00000583667 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.58□□□□□ -0.4
GGA3-217ENST00000583667 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.57□□□□□ -0.4
GGA3-217ENST00000583667 TMEM191CA6NGB0 347 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 SIGLEC16A6NMB1 481 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 A8MXQ7 604 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 M0QZQ0 153 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 CYB561D2O14569 222 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 DDX3YO15523 660 aaKnown RBP12.57□□□□□ -0.4
GGA3-217ENST00000583667 FTCDO95954 541 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 TUBBP07437 444 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 FGFR1P11362 822 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 CTNNA2P26232 953 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 PEX5P50542 639 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 CLCNKBP51801 687 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 SNX16P57768 344 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 CFAP221Q4G0U5 840 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 CD300LGQ6UXG3 332 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 TMC5Q6UXY8 1006 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 MMS22LQ6ZRQ5 1243 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 TMEM110Q86TL2 294 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 PDCL2Q8N4E4 241 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 SLC44A3Q8N4M1 653 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 ANKRD52Q8NB46 1076 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 C3orf20Q8ND61 904 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 FNIP1Q8TF40 1166 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 COG1Q8WTW3 980 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 SLC35F5Q8WV83 523 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 RABGGTAQ92696 567 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 C18orf8Q96DM3 657 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 SENP8Q96LD8 212 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 SELENOOQ9BVL4 669 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 SLC4A5Q9BY07 1137 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 SNX25Q9H3E2 840 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 GOLGA2P5Q9HBQ8 144 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 ASH1LQ9NR48 2969 aaKnown RBP12.57□□□□□ -0.4
GGA3-217ENST00000583667 RNF19AQ9NV58 838 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 DSEQ9UL01 958 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 PCDHA3Q9Y5H8 950 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 SCN1AP35498 2009 aa12.57□□□□□ -0.4
GGA3-217ENST00000583667 MYH10P35580 1976 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 CCDC66A2RUB6 948 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 MYO1FO00160 1098 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 HOXA2O43364 376 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 TBC1D4O60343 1298 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 LILRB5O75023 590 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 SRGAP2O75044 1071 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 PROSCO94903 275 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 ZIC2O95409 532 aaPredicted RBP12.56□□□□□ -0.4
GGA3-217ENST00000583667 LAG3P18627 525 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 KCNA4P22459 653 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 PAFAH1B1P43034 410 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 KRT17Q04695 432 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 CSTF1Q05048 431 aaKnown RBP12.56□□□□□ -0.4
GGA3-217ENST00000583667 SPEM2Q0P670 501 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 SMC1AQ14683 1233 aaKnown RBP12.56□□□□□ -0.4
GGA3-217ENST00000583667 PTPN20Q4JDL3 420 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 NOMO2Q5JPE7 1267 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 ACOT1Q86TX2 421 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 ZDHHC17Q8IUH5 632 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 PASD1Q8IV76 773 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 ADGRF2Q8IZF7 708 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 NIPA2Q8N8Q9 360 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 C1orf131Q8NDD1 294 aaKnown RBP12.56□□□□□ -0.4
GGA3-217ENST00000583667 PJA1Q8NG27 643 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 OR6B3Q8NGW1 331 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 GPR152Q8TDT2 470 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 UBXN4Q92575 508 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 MCRS1Q96EZ8 462 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 HNRNPABQ99729 332 aaKnown RBP12.56□□□□□ -0.4
GGA3-217ENST00000583667 C11orf70Q9BRQ4 267 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 UBXN6Q9BZV1 441 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 FOXQ1Q9C009 403 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 DZANK1Q9NVP4 752 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 CYTH4Q9UIA0 394 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 TSPAN16Q9UKR8 245 aa12.56□□□□□ -0.4
GGA3-217ENST00000583667 PDE2AO00408 941 aaPredicted RBP12.55□□□□□ -0.4
GGA3-217ENST00000583667 LAMTOR5O43504 91 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 SRFP11831 508 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 EPCAMP16422 314 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 TYMPP19971 482 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 COMTP21964 271 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 LMO2P25791 158 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 CTNNA1P35221 906 aaKnown RBP12.55□□□□□ -0.4
GGA3-217ENST00000583667 SCNN1AP37088 669 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 PDCLQ13371 301 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 MESDQ14696 234 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 CLLU1OSQ5K130 101 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 PPP1R26Q5T8A7 1209 aaPredicted RBP12.55□□□□□ -0.4
GGA3-217ENST00000583667 LRRC38Q5VT99 294 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 CCDC149Q6ZUS6 474 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 ARCQ7LC44 396 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 GPR149Q86SP6 731 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 OSTM1Q86WC4 334 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 MMGT1Q8N4V1 131 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 UBL4BQ8N7F7 174 aa12.55□□□□□ -0.4
GGA3-217ENST00000583667 URGCPQ8TCY9 931 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms