RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 TLCD1Q96CP7 247 aa23.66■■□□□ 1.38
CCDC47-204ENST00000582252 ZFP42Q96MM3 310 aa23.66■■□□□ 1.38
CCDC47-204ENST00000582252 CNOT10Q9H9A5 744 aaKnown RBP23.66■■□□□ 1.38
CCDC47-204ENST00000582252 AGO3Q9H9G7 860 aaKnown RBP23.66■■□□□ 1.38
CCDC47-204ENST00000582252 ZNF487B1APH4 448 aa23.65■■□□□ 1.38
CCDC47-204ENST00000582252 PITPNM1O00562 1244 aa23.65■■□□□ 1.38
CCDC47-204ENST00000582252 RASGRF2O14827 1237 aa23.65■■□□□ 1.38
CCDC47-204ENST00000582252 MDM4O15151 490 aa23.65■■□□□ 1.38
CCDC47-204ENST00000582252 AGTP01019 485 aa23.65■■□□□ 1.38
CCDC47-204ENST00000582252 SKIP12755 728 aa23.65■■□□□ 1.38
CCDC47-204ENST00000582252 LHX1P48742 406 aa23.65■■□□□ 1.38
CCDC47-204ENST00000582252 ATP11AP98196 1134 aa23.65■■□□□ 1.38
CCDC47-204ENST00000582252 SCYL2Q6P3W7 929 aa23.65■■□□□ 1.38
CCDC47-204ENST00000582252 TRAF7Q6Q0C0 670 aa23.65■■□□□ 1.38
CCDC47-204ENST00000582252 TOX2Q96NM4 488 aa23.65■■□□□ 1.38
CCDC47-204ENST00000582252 PADI3Q9ULW8 664 aa23.65■■□□□ 1.38
CCDC47-204ENST00000582252 SHOC2Q9UQ13 582 aa23.65■■□□□ 1.38
CCDC47-204ENST00000582252 SMAPO00193 183 aa23.64■■□□□ 1.38
CCDC47-204ENST00000582252 CD48P09326 243 aa23.64■■□□□ 1.38
CCDC47-204ENST00000582252 SELPP16109 830 aa23.64■■□□□ 1.38
CCDC47-204ENST00000582252 PTPN1P18031 435 aaKnown RBP23.64■■□□□ 1.38
CCDC47-204ENST00000582252 CD52P31358 61 aa23.64■■□□□ 1.38
CCDC47-204ENST00000582252 MDH1P40925 334 aaKnown RBP23.64■■□□□ 1.38
CCDC47-204ENST00000582252 MAGOHP61326 146 aaKnown RBP23.64■■□□□ 1.38
CCDC47-204ENST00000582252 OSTM1Q86WC4 334 aa23.64■■□□□ 1.38
CCDC47-204ENST00000582252 GAD1Q99259 594 aa23.64■■□□□ 1.38
CCDC47-204ENST00000582252 TMEM121Q9BTD3 319 aa23.64■■□□□ 1.38
CCDC47-204ENST00000582252 DUSP16Q9BY84 665 aa23.64■■□□□ 1.38
CCDC47-204ENST00000582252 CALCOCO1Q9P1Z2 691 aa23.64■■□□□ 1.38
CCDC47-204ENST00000582252 TLDC2A0PJX2 215 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 SRRM3A6NNA2 597 aaPredicted RBP23.64■■□□□ 1.37
CCDC47-204ENST00000582252 DCDC2CA8MYV0 355 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 GABRDO14764 452 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 HCRTO43612 131 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 ZNF623O75123 536 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 LCP1P13796 627 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 PAX3P23760 479 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 ATP5DP30049 168 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 EIF3EP60228 445 aaKnown RBP23.64■■□□□ 1.37
CCDC47-204ENST00000582252 DPYSL3Q14195 570 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 SH3PXD2AQ5TCZ1 1133 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 LRRC31Q6UY01 552 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 CYP4V2Q6ZWL3 525 aaPredicted RBP23.64■■□□□ 1.37
CCDC47-204ENST00000582252 LRRC8DQ7L1W4 858 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 DIS3LQ8TF46 1054 aaKnown RBP23.64■■□□□ 1.37
CCDC47-204ENST00000582252 KHSRPQ92945 711 aaKnown RBP eCLIP23.64■■□□□ 1.37
CCDC47-204ENST00000582252 PGBD4Q96DM1 585 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 SENP8Q96LD8 212 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 TTC25Q96NG3 672 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 CCDC77Q9BR77 488 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 UBN1Q9NPG3 1134 aa23.64■■□□□ 1.37
CCDC47-204ENST00000582252 IFNB1P01574 187 aa23.63■■□□□ 1.37
CCDC47-204ENST00000582252 TGM2P21980 687 aa23.63■■□□□ 1.37
CCDC47-204ENST00000582252 TAF5Q15542 800 aa23.63■■□□□ 1.37
CCDC47-204ENST00000582252 P3H4Q92791 437 aa23.63■■□□□ 1.37
CCDC47-204ENST00000582252 RNF157Q96PX1 679 aa23.63■■□□□ 1.37
CCDC47-204ENST00000582252 LPIN3Q9BQK8 851 aa23.63■■□□□ 1.37
CCDC47-204ENST00000582252 C11orf49Q9H6J7 331 aa23.63■■□□□ 1.37
CCDC47-204ENST00000582252 ARL5CA6NH57 179 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 ACSL3O95573 720 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 NPR3P17342 541 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 SKIDA1Q1XH10 827 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 WSCD1Q658N2 575 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 MFSD5Q6N075 450 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 DSTYKQ6XUX3 929 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 GSTCDQ8NEC7 633 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 SPATA18Q8TC71 538 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 SERPINB12Q96P63 405 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 ZNF670Q9BS34 389 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 MED10Q9BTT4 135 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 B3GNT5Q9BYG0 378 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 PHACTR1Q9C0D0 580 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 MCOLN1Q9GZU1 580 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 ADAM7Q9H2U9 754 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.62■■□□□ 1.37
CCDC47-204ENST00000582252 GABBR2O75899 941 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 STIP1P31948 543 aaKnown RBP23.62■■□□□ 1.37
CCDC47-204ENST00000582252 ROR1Q01973 937 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 NOMO1Q15155 1222 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 TRIM60Q495X7 471 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 TAOK1Q7L7X3 1001 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 STRADAQ7RTN6 431 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 KCTD13Q8WZ19 329 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 CENPIQ92674 756 aaPredicted RBP23.62■■□□□ 1.37
CCDC47-204ENST00000582252 RBM15Q96T37 977 aaKnown RBP eCLIP23.62■■□□□ 1.37
CCDC47-204ENST00000582252 DDX23Q9BUQ8 820 aaKnown RBP23.62■■□□□ 1.37
CCDC47-204ENST00000582252 SNRNP25Q9BV90 132 aaKnown RBP23.62■■□□□ 1.37
CCDC47-204ENST00000582252 DDX43Q9NXZ2 648 aaKnown RBP23.62■■□□□ 1.37
CCDC47-204ENST00000582252 NINJ2Q9NZG7 142 aa23.62■■□□□ 1.37
CCDC47-204ENST00000582252 APOL1O14791 398 aa23.61■■□□□ 1.37
CCDC47-204ENST00000582252 ABHD2P08910 425 aa23.61■■□□□ 1.37
CCDC47-204ENST00000582252 ZSCAN5DPP0CG00 497 aa23.61■■□□□ 1.37
CCDC47-204ENST00000582252 RBP3P10745 1247 aa23.61■■□□□ 1.37
CCDC47-204ENST00000582252 TLE2Q04725 743 aa23.61■■□□□ 1.37
CCDC47-204ENST00000582252 MBTPS1Q14703 1052 aa23.61■■□□□ 1.37
CCDC47-204ENST00000582252 ERMARDQ5T6L9 678 aa23.61■■□□□ 1.37
CCDC47-204ENST00000582252 RNASEH2BQ5TBB1 312 aaKnown RBP23.61■■□□□ 1.37
CCDC47-204ENST00000582252 AGMOQ6ZNB7 445 aa23.61■■□□□ 1.37
CCDC47-204ENST00000582252 FUKQ8N0W3 1084 aa23.61■■□□□ 1.37
CCDC47-204ENST00000582252 GLIS1Q8NBF1 620 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms