RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 SECISBP2LQ93073 1101 aaKnown RBP13.97□□□□□ -0.17
NUP85-215ENST00000580879 ZFRQ96KR1 1074 aaKnown RBP13.97□□□□□ -0.17
NUP85-215ENST00000580879 VPS16Q9H269 839 aa13.97□□□□□ -0.17
NUP85-215ENST00000580879 DLGAP2Q9P1A6 1054 aa13.97□□□□□ -0.17
NUP85-215ENST00000580879 NAGPAQ9UK23 515 aa13.97□□□□□ -0.17
NUP85-215ENST00000580879 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.97□□□□□ -0.17
NUP85-215ENST00000580879 USP3Q9Y6I4 520 aa13.97□□□□□ -0.17
NUP85-215ENST00000580879 CACNA1HO95180 2353 aa13.97□□□□□ -0.17
NUP85-215ENST00000580879 MYO16Q9Y6X6 1858 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 BECN2A8MW95 431 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 PIK3R2O00459 728 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 GALR2O43603 387 aaPredicted RBP13.96□□□□□ -0.17
NUP85-215ENST00000580879 LETM1O95202 739 aaPredicted RBP13.96□□□□□ -0.17
NUP85-215ENST00000580879 PNMA6AP0CW24 399 aaPredicted RBP13.96□□□□□ -0.17
NUP85-215ENST00000580879 SETSIPP0DME0 302 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 RARGP13631 454 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 CTHP32929 405 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 TUBP50607 506 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 ADIGQ0VDE8 80 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 KCNMA1Q12791 1236 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 TCF15Q12870 199 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 PDGFRLQ15198 375 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 CNGA2Q16280 664 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 EML3Q32P44 896 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 ANO6Q4KMQ2 910 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 PKDCCQ504Y2 493 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 RAB41Q5JT25 222 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 NAIF1Q69YI7 327 aaPredicted RBP13.96□□□□□ -0.17
NUP85-215ENST00000580879 ENOSF1Q7L5Y1 443 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 CCDC186Q7Z3E2 898 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 AOPEPQ8N6M6 819 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 WBP2Q969T9 261 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 LSM14BQ9BX40 385 aaKnown RBP13.96□□□□□ -0.17
NUP85-215ENST00000580879 ULBP1Q9BZM6 244 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 UBXN6Q9BZV1 441 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 C8orf33Q9H7E9 229 aaPredicted RBP13.96□□□□□ -0.17
NUP85-215ENST00000580879 LRRC4Q9HBW1 653 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 DNAJC12Q9UKB3 198 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 CNTN6Q9UQ52 1028 aa13.96□□□□□ -0.17
NUP85-215ENST00000580879 MRPS17Q9Y2R5 130 aaKnown RBP13.96□□□□□ -0.17
NUP85-215ENST00000580879 KIF26AQ9ULI4 1882 aaPredicted RBP13.95□□□□□ -0.18
NUP85-215ENST00000580879 H0Y858 1186 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 THAP12O43422 761 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 ZBED1O96006 694 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 LCP1P13796 627 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 TCF3P15923 654 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 PLA2G4AP47712 749 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 NCAPHQ15003 741 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 PON2Q15165 354 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 C10orf120Q5SQS8 335 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 DPY19L2P1Q6NXN4 242 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 PMF1Q6P1K2 205 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 DENND1BQ6P3S1 775 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 RALGPS2Q86X27 583 aaPredicted RBP13.95□□□□□ -0.18
NUP85-215ENST00000580879 ZNF687Q8N1G0 1237 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 CPA6Q8N4T0 437 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 CHFRQ96EP1 664 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 ECT2Q9H8V3 914 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 CYLDQ9NQC7 956 aa13.95□□□□□ -0.18
NUP85-215ENST00000580879 RBM12Q9NTZ6 932 aaKnown RBP13.95□□□□□ -0.18
NUP85-215ENST00000580879 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.95□□□□□ -0.18
NUP85-215ENST00000580879 GABBR2O75899 941 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 GNA15P30679 374 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 ATP5C1P36542 298 aaKnown RBP13.94□□□□□ -0.18
NUP85-215ENST00000580879 KLK7P49862 253 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 YWHAGP61981 247 aaKnown RBP eCLIP13.94□□□□□ -0.18
NUP85-215ENST00000580879 FZD5Q13467 585 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 RAPGEF1Q13905 1077 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 STILQ15468 1287 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 KLHL40Q2TBA0 621 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 BHLHA9Q7RTU4 235 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 DDX42Q86XP3 938 aaKnown RBP eCLIP13.94□□□□□ -0.18
NUP85-215ENST00000580879 SIX6OS1Q8N1H7 587 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 SLC35F5Q8WV83 523 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 SHC3Q92529 594 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 ATP2A3Q93084 1043 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 FAM81BQ96LP2 452 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 NELL2Q99435 816 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 KLF16Q9BXK1 252 aaPredicted RBP13.94□□□□□ -0.18
NUP85-215ENST00000580879 OSBPL6Q9BZF3 934 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 KCNH6Q9H252 994 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 HSD3B7Q9H2F3 369 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 LMAN1LQ9HAT1 526 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 FAM86C1Q9NVL1 165 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 SH3BP1Q9Y3L3 701 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 FHOD1Q9Y613 1164 aa13.94□□□□□ -0.18
NUP85-215ENST00000580879 HELZP42694 1942 aaKnown RBP13.94□□□□□ -0.18
NUP85-215ENST00000580879 SYCE3A1L190 88 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 FOXN3O00409 490 aaPredicted RBP13.93□□□□□ -0.18
NUP85-215ENST00000580879 RALAP11233 206 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 GJA4P35212 333 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 COPB1P53618 953 aaKnown RBP13.93□□□□□ -0.18
NUP85-215ENST00000580879 PTPN5P54829 565 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 MLLT6P55198 1093 aaPredicted RBP13.93□□□□□ -0.18
NUP85-215ENST00000580879 EFEMP1Q12805 493 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 ANGPT1Q15389 498 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 KLHDC7AQ5VTJ3 777 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 PM20D1Q6GTS8 502 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 MIB1Q86YT6 1006 aa13.93□□□□□ -0.18
NUP85-215ENST00000580879 CLEC4CQ8WTT0 213 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms