RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 LINGO3P0C6S8 592 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 NCF2P19878 526 aaPredicted RBP15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 SULF1Q8IWU6 871 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 DEPDC1BQ8WUY9 529 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 LPIN3Q9BQK8 851 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 OGTO15294 1046 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 MAP3K7O43318 606 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 TBC1D12O60347 775 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 ZMPSTE24O75844 475 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 KRT37O76014 449 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 CDK16Q00536 496 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 C6orf163Q5TEZ5 329 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 SCUBE3Q8IX30 993 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 TEKT4Q8WW24 435 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 E2F7Q96AV8 911 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 ZNF214Q9UL59 606 aaPredicted RBP15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 STRIP2Q9ULQ0 834 aa15.32■□□□□ 0.04
CUEDC1-206ENST00000577830 MICAL2O94851 1124 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 GNAT1P11488 350 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 GNAZP19086 355 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 VHLP40337 213 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 PSEN1P49768 467 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 ATXN1P54253 815 aaKnown RBP15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 RPL10AP62906 217 aaKnown RBP15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 ATF7IP2Q5U623 682 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 BBS12Q6ZW61 710 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 DHX35Q9H5Z1 703 aaKnown RBP15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 PDLIM7Q9NR12 457 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 MRPL42Q9Y6G3 142 aaKnown RBP15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 MAGEB2O15479 319 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 SKIP12755 728 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 SLC25A11Q02978 314 aaKnown RBP15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 ZRSR2Q15696 482 aaKnown RBP15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 GJC2Q5T442 439 aaPredicted RBP15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 LRRC74BQ6ZQY2 392 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 GADL1Q6ZQY3 521 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 TDRPQ86YL5 185 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 RDM1Q8NG50 284 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 SHKBP1Q8TBC3 707 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 APOPT1Q96IL0 206 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 TEPSINQ96N21 525 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 PEBP4Q96S96 227 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 EBF4Q9BQW3 602 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 DHX33Q9H6R0 707 aaKnown RBP15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 GREB1LQ9C091 1923 aaPredicted RBP15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 MYH9P35579 1960 aaKnown RBP15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 PDE5AO76074 875 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 ATP6V1C1P21283 382 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 OSBPP22059 807 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 WDR49Q8IV35 697 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 MPP5Q8N3R9 675 aa15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 FARP1Q9Y4F1 1045 aaPredicted RBP15.31■□□□□ 0.04
CUEDC1-206ENST00000577830 SIGLEC16A6NMB1 481 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 SPATA31C2B4DYI2 1134 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 PSMG1O95456 288 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 SLC25A3Q00325 362 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 HSDL1Q3SXM5 330 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 SESTD1Q86VW0 696 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 CRLF3Q8IUI8 442 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 B3GNT5Q9BYG0 378 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 ASNSD1Q9NWL6 643 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 SCOCQ9UIL1 159 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 MTO1Q9Y2Z2 717 aaKnown RBP15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 MED7O43513 233 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 ARL2P36404 184 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 WASHC2DQ5SRD0 308 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 TREML1Q86YW5 311 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 NRG4Q8WWG1 115 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 SDCBP2Q9H190 292 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 PRR5-ARHGAP8B1AHC4 643 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 MAFGO15525 162 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 EIF4BP23588 611 aaKnown RBP15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 GTF2A2P52657 109 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 SARNPP82979 210 aaKnown RBP15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 ARHGAP8P85298 464 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 PDE1BQ01064 536 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 PTPN11Q06124 597 aaPredicted RBP15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 CA9Q16790 459 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 XYLT1Q86Y38 959 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 RBM15BQ8NDT2 890 aaKnown RBP15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 NLGN2Q8NFZ4 835 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 TRPM4Q8TD43 1214 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 PYDC1Q8WXC3 89 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 VPS11Q9H270 941 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 VCXQ9H320 206 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 R3HDMLQ9H3Y0 253 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 AKT3Q9Y243 479 aa15.3■□□□□ 0.04
CUEDC1-206ENST00000577830 SPECC1L-ADORA2AF8WAN1 911 aa15.29■□□□□ 0.04
CUEDC1-206ENST00000577830 APOC4-APOC2K7ER74 178 aa15.29■□□□□ 0.04
CUEDC1-206ENST00000577830 TM9SF1O15321 606 aa15.29■□□□□ 0.04
CUEDC1-206ENST00000577830 APOC2P02655 101 aa15.29■□□□□ 0.04
CUEDC1-206ENST00000577830 SNRPAP09012 282 aaKnown RBP15.29■□□□□ 0.04
CUEDC1-206ENST00000577830 PTPRAP18433 802 aa15.29■□□□□ 0.04
CUEDC1-206ENST00000577830 ASPAP45381 313 aa15.29■□□□□ 0.04
CUEDC1-206ENST00000577830 NEK3P51956 506 aa15.29■□□□□ 0.04
CUEDC1-206ENST00000577830 TMEM62Q0P6H9 643 aa15.29■□□□□ 0.04
CUEDC1-206ENST00000577830 RGS9BPQ6ZS82 235 aa15.29■□□□□ 0.04
CUEDC1-206ENST00000577830 RELL1Q8IUW5 271 aa15.29■□□□□ 0.04
CUEDC1-206ENST00000577830 CCNYQ8ND76 341 aa15.29■□□□□ 0.04
CUEDC1-206ENST00000577830 SLC26A7Q8TE54 656 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms