RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 FGFBP2Q9BYJ0 223 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 CD248Q9HCU0 757 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 INTS13Q9NVM9 706 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 EHD2Q9NZN4 543 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 EXOC7Q9UPT5 735 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 R3HCC1Q9Y3T6 440 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 RAD54BQ9Y620 910 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 PLXND1Q9Y4D7 1925 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 PTPRJQ12913 1337 aa10.77□□□□□ -0.69
NPLOC4-220ENST00000576940 SETXQ7Z333 2677 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 E2F8A0AVK6 867 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 WASH3PC4AMC7 463 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 CLDN5O00501 218 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 COCHO43405 550 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 ZNF217O75362 1048 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 PRPF6O94906 941 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 GCNT3O95395 438 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 GARTP22102 1010 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 LONP1P36776 959 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 TOGARAM2Q6ZUX3 1019 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 TRMT11Q7Z4G4 463 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 RABEPKQ7Z6M1 372 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 CHPFQ8IZ52 775 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 SYCP3Q8IZU3 236 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 TERB1Q8NA31 727 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 OR6B3Q8NGW1 331 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 SETD7Q8WTS6 366 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 ANKRD36BP1Q96IX9 119 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 SLITRK1Q96PX8 696 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 KCNK16Q96T55 309 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 ZNF518BQ9C0D4 1074 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 DPEP3Q9H4B8 488 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 IL21RQ9HBE5 538 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 SPHK2Q9NRA0 654 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 SH3BP1Q9Y3L3 701 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 STARD13Q9Y3M8 1113 aa10.76□□□□□ -0.69
NPLOC4-220ENST00000576940 URB1O60287 2271 aaKnown RBP10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 PRRT4C9JH25 899 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 H3BQV1 296 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 ZBTB24O43167 697 aaPredicted RBP10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 CBFA2T3O75081 653 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 NDUFS2O75306 463 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 IRF1P10914 325 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 PTPN1P18031 435 aaKnown RBP10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 YWHAQP27348 245 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 GRIK2Q13002 908 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 DUOXA2Q1HG44 320 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 SDE2Q6IQ49 451 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 DDX42Q86XP3 938 aaKnown RBP eCLIP10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 NUP93Q8N1F7 819 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 GPD1LQ8N335 351 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 SCAMP5Q8TAC9 235 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 FBXO32Q969P5 355 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 DNAJC19Q96DA6 116 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 CRELD1Q96HD1 420 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 MRGPRX1Q96LB2 322 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 B3GNT5Q9BYG0 378 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 TRIM9Q9C026 710 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 SNX25Q9H3E2 840 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 FAM124BQ9H5Z6 455 aaPredicted RBP10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 CCSER2Q9H7U1 834 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 PCOLCE2Q9UKZ9 415 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 APOBEC2Q9Y235 224 aaKnown RBP10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 PCDHB13Q9Y5F0 798 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 ACACAQ13085 2346 aa10.75□□□□□ -0.69
NPLOC4-220ENST00000576940 APC2O95996 2303 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 EIF4E1BA6NMX2 242 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 HOXC11O43248 304 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 TNNC2P02585 160 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 GNSP15586 552 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 GJB2P29033 226 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 PGFP49763 221 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 CYP4F3Q08477 520 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 SF3A1Q15459 793 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 PREPLQ4J6C6 727 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 HECTD3Q5T447 861 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 SYCP2LQ5T4T6 812 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 GRAMD4Q6IC98 578 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 TPGS1Q6ZTW0 290 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 NUDT18Q6ZVK8 323 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 TMPRSS7Q7RTY8 843 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 TRAPPC11Q7Z392 1133 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 CBWD2Q8IUF1 395 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 OTUB2Q96DC9 234 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 DNAJC17Q9NVM6 304 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 CACNA2D2Q9NY47 1150 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 KIAA1522Q9P206 1035 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 PTPRBP23467 1997 aa10.74□□□□□ -0.69
NPLOC4-220ENST00000576940 TRABD2BA6NFA1 517 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 ZNF233A6NK53 670 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 GOLGA8CPA6NN73 597 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 A8MXQ7 604 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 NEDD8-MDP1E9PL57 170 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 TACC1O75410 805 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 TBX18O95935 607 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 ATXN1LP0C7T5 689 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 IDEP14735 1019 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 GAP43P17677 238 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 BNC1Q01954 994 aa10.73□□□□□ -0.69
NPLOC4-220ENST00000576940 WDR72Q3MJ13 1102 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms