RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 LDHDQ86WU2 507 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.1■□□□□ 0.01
SCARF1-209ENST00000576012 OR5B17Q8NGF7 314 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 JOSD2Q8TAC2 188 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 ADAM32Q8TC27 787 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 ALKBH8Q96BT7 664 aaKnown RBP15.1■□□□□ 0.01
SCARF1-209ENST00000576012 RBM17Q96I25 401 aaKnown RBP15.1■□□□□ 0.01
SCARF1-209ENST00000576012 MXRA8Q9BRK3 442 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 RAB6CQ9H0N0 254 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 SCINQ9Y6U3 715 aa15.1■□□□□ 0.01
SCARF1-209ENST00000576012 E9PBE3 544 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 F8W8V4 182 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 AIM2O14862 343 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 XPO1O14980 1071 aaKnown RBP15.09■□□□□ 0.01
SCARF1-209ENST00000576012 DCXO43602 365 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 KLHL41O60662 606 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 GRAP2O75791 330 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 RXRBP28702 533 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 MRPS5P82675 430 aaKnown RBP15.09■□□□□ 0.01
SCARF1-209ENST00000576012 CUL2Q13617 745 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 CNGA3Q16281 694 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 DBN1Q16643 649 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 C6orf52Q5T4I8 152 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 GPAT2Q6NUI2 795 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 CASC4Q6P4E1 433 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 KCNK4Q9NYG8 393 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 ZC3H7BQ9UGR2 993 aaKnown RBP15.09■□□□□ 0.01
SCARF1-209ENST00000576012 FARP1Q9Y4F1 1045 aaPredicted RBP15.09■□□□□ 0.01
SCARF1-209ENST00000576012 GOLGA8QA0A0J9YX86 632 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 GOLGA8OA6NCC3 632 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 GOLGA8NF8WBI6 632 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 NCKAP1LP55160 1127 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 MRPS22P82650 360 aaKnown RBP15.09■□□□□ 0.01
SCARF1-209ENST00000576012 MAP3K10Q02779 954 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 MTMR1Q13613 665 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 DLGAP5Q15398 846 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 PLEKHA7Q6IQ23 1121 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 SESTD1Q86VW0 696 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 RAB3IL1Q8TBN0 382 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 USP13Q92995 863 aaPredicted RBP15.09■□□□□ 0.01
SCARF1-209ENST00000576012 MRPL1Q9BYD6 325 aaKnown RBP15.09■□□□□ 0.01
SCARF1-209ENST00000576012 ANLNQ9NQW6 1124 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 DTNAQ9Y4J8 743 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 COL5A3P25940 1745 aaPredicted RBP15.09■□□□□ 0.01
SCARF1-209ENST00000576012 NHSQ6T4R5 1651 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 C10orf71Q711Q0 1435 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 TMEM191CA6NGB0 347 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 DKC1O60832 514 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCARF1-209ENST00000576012 TMEM191BP0C7N4 346 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 PABPC4LP0CB38 370 aaKnown RBP15.09■□□□□ 0.01
SCARF1-209ENST00000576012 STIP1P31948 543 aaKnown RBP15.09■□□□□ 0.01
SCARF1-209ENST00000576012 DPYSL3Q14195 570 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 ATG16L1Q676U5 607 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 PHTF2Q8N3S3 785 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 PGLYRP2Q96PD5 576 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 HAPLN3Q96S86 360 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 CCDC106Q9BWC9 280 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 ARHGEF38Q9NXL2 777 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 UBAP1Q9NZ09 502 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 KCND2Q9NZV8 630 aa15.09■□□□□ 0.01
SCARF1-209ENST00000576012 APOBEC2Q9Y235 224 aaKnown RBP15.09■□□□□ 0.01
SCARF1-209ENST00000576012 HBS1LQ9Y450 684 aaKnown RBP15.09■□□□□ 0.01
SCARF1-209ENST00000576012 TTLL13PA6NNM8 815 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 WDR64B1ANS9 1081 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 H3BSA7 217 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 ZSCAN9O15535 394 aaPredicted RBP15.08■□□□□ 0
SCARF1-209ENST00000576012 COPAP53621 1224 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 OSTNP61366 133 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 GCNT1Q02742 428 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 RC3H1Q5TC82 1133 aaKnown RBP15.08■□□□□ 0
SCARF1-209ENST00000576012 TRIM67Q6ZTA4 783 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 SDCCAG8Q86SQ7 713 aaPredicted RBP15.08■□□□□ 0
SCARF1-209ENST00000576012 METTL25Q8N6Q8 603 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 ZFP28Q8NHY6 868 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 SLC44A1Q8WWI5 657 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 XAB2Q9HCS7 855 aaKnown RBP15.08■□□□□ 0
SCARF1-209ENST00000576012 SMYD2Q9NRG4 433 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 GPATCH2LQ9NWQ4 482 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 CCPG1Q9ULG6 757 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 PLLPQ9Y342 182 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 COQ4Q9Y3A0 265 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 ASTN2O75129 1339 aaPredicted RBP15.08■□□□□ 0
SCARF1-209ENST00000576012 NEMP1O14524 444 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 TBC1D12O60347 775 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 KRT37O76014 449 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 ITGAVP06756 1048 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 VIL1P09327 827 aaKnown RBP15.08■□□□□ 0
SCARF1-209ENST00000576012 DESP17661 470 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 ADARP55265 1226 aaKnown RBP15.08■□□□□ 0
SCARF1-209ENST00000576012 PKNOX1P55347 436 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 MYBPC2Q14324 1141 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 SH3PXD2AQ5TCZ1 1133 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 SCYL2Q6P3W7 929 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 ZBTB33Q86T24 672 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 TCHPQ9BT92 498 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 NXF1Q9UBU9 619 aaKnown RBP15.08■□□□□ 0
SCARF1-209ENST00000576012 POMPQ9Y244 141 aa15.08■□□□□ 0
SCARF1-209ENST00000576012 VILLO15195 856 aa15.07■□□□□ 0
SCARF1-209ENST00000576012 CSDE1O75534 798 aaKnown RBP15.07■□□□□ 0
SCARF1-209ENST00000576012 STAM2O75886 525 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms