RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 DFNA5O60443 496 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 PFKFB2O60825 505 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 OAS1P00973 400 aaKnown RBP6.28□□□□□ -1.4
SMG6-219ENST00000575663 C1SP09871 688 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 GRIK1P39086 918 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 GRIA4P48058 902 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 LHX1P48742 406 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 ZNF132P52740 706 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 FOSBP53539 338 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 NCKAP1LP55160 1127 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 PCBP4P57723 403 aaKnown RBP6.28□□□□□ -1.4
SMG6-219ENST00000575663 BNC1Q01954 994 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 RAD51AP2Q09MP3 1159 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 KCNH2Q12809 1159 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 MYO1EQ12965 1108 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 ORC1Q13415 861 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 E2F5Q15329 346 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 TBC1D25Q3MII6 688 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 PKDCCQ504Y2 493 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 HES3Q5TGS1 186 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 TDRD10Q5VZ19 366 aaKnown RBP6.28□□□□□ -1.4
SMG6-219ENST00000575663 ADAT2Q7Z6V5 191 aaKnown RBP6.28□□□□□ -1.4
SMG6-219ENST00000575663 MIB1Q86YT6 1006 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 PDZD8Q8NEN9 1154 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 PRCCQ92733 491 aaPredicted RBP6.28□□□□□ -1.4
SMG6-219ENST00000575663 ERLEC1Q96DZ1 483 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 PKMYT1Q99640 499 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 TTLL2Q9BWV7 592 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 TM6SF1Q9BZW5 370 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 SLC6A17Q9H1V8 727 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 CD248Q9HCU0 757 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 SPHK2Q9NRA0 654 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 GMIPQ9P107 970 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 MAGEC2Q9UBF1 373 aaPredicted RBP6.28□□□□□ -1.4
SMG6-219ENST00000575663 L1RE1Q9UN81 338 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 RAD54BQ9Y620 910 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 PLXNB3Q9ULL4 1909 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 MUC22E2RYF6 1773 aaPredicted RBP6.28□□□□□ -1.4
SMG6-219ENST00000575663 TENM4Q6N022 2769 aa6.28□□□□□ -1.4
SMG6-219ENST00000575663 CITO14578 2027 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 NEDD8-MDP1E9PL57 170 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 NPC1O15118 1278 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 EPB41L2O43491 1005 aaKnown RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 CACNG3O60359 315 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 BRINP1O60477 761 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 SYNCRIPO60506 623 aaKnown RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 IL18RAPO95256 599 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 POLR2BP30876 1174 aaKnown RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 CSNK1EP49674 416 aaKnown RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 ACOT2P49753 483 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 NOP14P78316 857 aaKnown RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 IRX6P78412 446 aaPredicted RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 POU5F1Q01860 360 aaKnown RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 CYP27A1Q02318 531 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 TARDBPQ13148 414 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMG6-219ENST00000575663 GNL2Q13823 731 aaKnown RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 LY6DQ14210 128 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 ANKRD1Q15327 319 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 ZNF174Q15697 407 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 KIF19Q2TAC6 998 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 FUT11Q495W5 492 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 TTC38Q5R3I4 469 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 ARHGAP40Q5TG30 622 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 ADALQ6DHV7 355 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 ERICH1Q86X53 443 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 FMNL3Q8IVF7 1028 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 KCTD17Q8N5Z5 321 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 TOP6BLQ8N6T0 577 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 LRRC52Q8N7C0 313 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 IGSF22Q8N9C0 903 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 KCNN1Q92952 543 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 MYLPFQ96A32 169 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 SKA1Q96BD8 255 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 SIPA1Q96FS4 1042 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 MED8Q96G25 268 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 CNDP2Q96KP4 475 aaKnown RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 ZFRQ96KR1 1074 aaKnown RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 NAP1L5Q96NT1 182 aaPredicted RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 ACOX2Q99424 681 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 DUSP9Q99956 384 aaKnown RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 SYT15Q9BQS2 421 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 NUP58Q9BVL2 599 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 FAM117AQ9C073 453 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 NACA2Q9H009 215 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 RNF38Q9H0F5 515 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 OSGEPQ9NPF4 335 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 ITM2CQ9NQX7 267 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMG6-219ENST00000575663 NXF1Q9UBU9 619 aaKnown RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 ODF2LQ9ULJ1 636 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 NOL7Q9UMY1 257 aaKnown RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 ANKRD6Q9Y2G4 727 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 R3HCC1Q9Y3T6 440 aaKnown RBP6.27□□□□□ -1.41
SMG6-219ENST00000575663 SNX11Q9Y5W9 270 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 ATG2BQ96BY7 2078 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 ADAMTS9Q9P2N4 1935 aa6.27□□□□□ -1.41
SMG6-219ENST00000575663 NAV2Q8IVL1 2488 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 ANK1P16157 1881 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 YKT6O15498 198 aa6.26□□□□□ -1.41
SMG6-219ENST00000575663 PAPSS1O43252 624 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms