RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 KRT82Q9NSB4 513 aa6.42□□□□□ -1.38
TRAPPC1-204ENST00000571947 ZDHHC18Q9NUE0 388 aa6.42□□□□□ -1.38
TRAPPC1-204ENST00000571947 GRHL1Q9NZI5 618 aa6.42□□□□□ -1.38
TRAPPC1-204ENST00000571947 WHRNQ9P202 907 aa6.42□□□□□ -1.38
TRAPPC1-204ENST00000571947 SNX24Q9Y343 169 aa6.42□□□□□ -1.38
TRAPPC1-204ENST00000571947 PCDHB7Q9Y5E2 793 aa6.42□□□□□ -1.38
TRAPPC1-204ENST00000571947 ANKRD36A6QL64 1941 aa6.42□□□□□ -1.38
TRAPPC1-204ENST00000571947 HELZP42694 1942 aaKnown RBP6.42□□□□□ -1.38
TRAPPC1-204ENST00000571947 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 DCDC2CA8MYV0 355 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 ZNF487B1APH4 448 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 HHLA1C9JL84 531 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 F8W810 466 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 AGPSO00116 658 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 SYN3O14994 580 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 HOXA2O43364 376 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 TRAPPC3O43617 180 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 CST8O60676 142 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 PPFIA2O75334 1257 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 OAZ2O95190 189 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 KRT14P02533 472 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 ITGAVP06756 1048 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 CD48P09326 243 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 ITIH2P19823 946 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 IVDP26440 423 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 OAS2P29728 719 aaKnown RBP6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 OR1G1P47890 313 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 NDUFV1P49821 464 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 TKTL1P51854 596 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 ATN1P54259 1190 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 CACNA2D1P54289 1103 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 VCPP55072 806 aaKnown RBP6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 CDH6P55285 790 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 DAOAP59103 153 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 YWHAZP63104 245 aaKnown RBP6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 CBX1P83916 185 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 TSPY1Q01534 308 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 TLE2Q04725 743 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 YWHAHQ04917 246 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 RNASELQ05823 741 aaKnown RBP6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 FAAP100Q0VG06 881 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 MTMR3Q13615 1198 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 BYSLQ13895 437 aaKnown RBP6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 TFDP2Q14188 446 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 DPYSL3Q14195 570 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 OASLQ15646 514 aaKnown RBP6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 SLC25A52Q3SY17 297 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 KCNT1Q5JUK3 1230 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 SPDYCQ5MJ68 293 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 CFAP58Q5T655 872 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 ERMARDQ5T6L9 678 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 SCYL2Q6P3W7 929 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 BNIPLQ7Z465 357 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 LRRTM3Q86VH5 581 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 RFX6Q8HWS3 928 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 NPAS4Q8IUM7 802 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 MAP7D3Q8IWC1 876 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 ABI1Q8IZP0 508 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 IQCKQ8N0W5 287 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 DEFB106AQ8N104 65 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 SIX6OS1Q8N1H7 587 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 CRIPAKQ8N1N5 446 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 SCML4Q8N228 414 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 BBOF1Q8ND07 529 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 OR10T2Q8NGX3 314 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 SLC35B2Q8TB61 432 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 HASPINQ8TF76 798 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 IRGQQ8WZA9 623 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 NDRG1Q92597 394 aaKnown RBP6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 HSPH1Q92598 858 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 ART4Q93070 314 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 NKD2Q969F2 451 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 NT5C3BQ969T7 300 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 SNF8Q96H20 258 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 CCDC114Q96M63 670 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 CASD1Q96PB1 797 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 RNF157Q96PX1 679 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 SLC2A13Q96QE2 648 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 NPY6RQ99463 290 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 FMO2Q99518 471 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 SNRNP25Q9BV90 132 aaKnown RBP6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 COLEC11Q9BWP8 271 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 TXLNGYQ9BZA5 131 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 ULBP1Q9BZM6 244 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 HIPK3Q9H422 1215 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 NRDE2Q9H7Z3 1164 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 PCDH18Q9HCL0 1135 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 PNPLA8Q9NP80 782 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 MED4Q9NPJ6 270 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 TMEM30AQ9NV96 361 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 TMLHEQ9NVH6 421 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 DNAJB4Q9UDY4 337 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 MTRF1LQ9UGC7 380 aaKnown RBP6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 DNPEPQ9ULA0 475 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 LRFN2Q9ULH4 789 aa6.41□□□□□ -1.38
TRAPPC1-204ENST00000571947 MYLKQ15746 1914 aa6.4□□□□□ -1.38
TRAPPC1-204ENST00000571947 GOLGA6BA6NDN3 693 aa6.4□□□□□ -1.38
TRAPPC1-204ENST00000571947 H3BQF6 201 aa6.4□□□□□ -1.38
TRAPPC1-204ENST00000571947 APOC4-APOC2K7ER74 178 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms