RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 SLC38A8A6NNN8 435 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 TGM5O43548 720 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 SPOPO43791 374 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 DAB1O75553 588 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 GABBR2O75899 941 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 VNN2O95498 520 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 FGF19O95750 216 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 LRG1P02750 347 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 LTFP02788 710 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 USP17L7P0C7H9 530 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 RALAP11233 206 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 TCP1P17987 556 aaKnown RBP12.49□□□□□ -0.41
CDRT1-206ENST00000571263 PSMA2P25787 234 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 HOXA9P31269 272 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 GBP1P32455 592 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 PCK1P35558 622 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 RNASE9P60153 205 aaKnown RBP12.49□□□□□ -0.41
CDRT1-206ENST00000571263 SLC25A52Q3SY17 297 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 PABPC1LQ4VXU2 614 aaKnown RBP12.49□□□□□ -0.41
CDRT1-206ENST00000571263 LRRC38Q5VT99 294 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 PLPP4Q5VZY2 271 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 BTBD8Q5XKL5 378 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 STRADAQ7RTN6 431 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 PHLDB2Q86SQ0 1253 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 NT5DC3Q86UY8 548 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 RHOT1Q8IXI2 618 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 KREMEN2Q8NCW0 462 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 RXFP2Q8WXD0 754 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 AUTS2Q8WXX7 1259 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 KHSRPQ92945 711 aaKnown RBP eCLIP12.49□□□□□ -0.41
CDRT1-206ENST00000571263 FAM149B1Q96BN6 582 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 TRMT2BQ96GJ1 504 aaKnown RBP12.49□□□□□ -0.41
CDRT1-206ENST00000571263 MYRFLQ96LU7 910 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 SLC2A13Q96QE2 648 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 OLA1Q9NTK5 396 aaKnown RBP12.49□□□□□ -0.41
CDRT1-206ENST00000571263 TMEM30AQ9NV96 361 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 LMCD1Q9NZU5 365 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 RNF14Q9UBS8 474 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 TJP2Q9UDY2 1190 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 INSL5Q9Y5Q6 135 aa12.49□□□□□ -0.41
CDRT1-206ENST00000571263 PIK3R2O00459 728 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 CES2O00748 559 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 SEC24AO95486 1093 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 KRT7P08729 469 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 POU2F2P09086 479 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 HNRNPA1P09651 372 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDRT1-206ENST00000571263 COMTP21964 271 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 DNAJB1P25685 340 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 CETN2P41208 172 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 CLCN4P51793 760 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 AIF1P55008 147 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 YWHAGP61981 247 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDRT1-206ENST00000571263 MTA1Q13330 715 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 CAMK1Q14012 370 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 BSPRYQ5W0U4 402 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 PAPD7Q5XG87 772 aaKnown RBP12.48□□□□□ -0.41
CDRT1-206ENST00000571263 CC2D1AQ6P1N0 951 aaPredicted RBP12.48□□□□□ -0.41
CDRT1-206ENST00000571263 CHRDL2Q6WN34 429 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 SND1Q7KZF4 910 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDRT1-206ENST00000571263 POLNQ7Z5Q5 900 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 DEFB106AQ8N104 65 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 LEMD2Q8NC56 503 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 STKLD1Q8NE28 680 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 JOSD2Q8TAC2 188 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 RNF139Q8WU17 664 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 ARNTL2Q8WYA1 636 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 FBXO32Q969P5 355 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 PGAP3Q96FM1 320 aaPredicted RBP12.48□□□□□ -0.41
CDRT1-206ENST00000571263 HES6Q96HZ4 224 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 PBKQ96KB5 322 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 ZNF512Q96ME7 567 aaPredicted RBP12.48□□□□□ -0.41
CDRT1-206ENST00000571263 CRISPLD1Q9H336 500 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 DDX56Q9NY93 547 aaKnown RBP12.48□□□□□ -0.41
CDRT1-206ENST00000571263 YIPF1Q9Y548 306 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 SAR1BQ9Y6B6 198 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 PTPRDP23468 1912 aa12.48□□□□□ -0.41
CDRT1-206ENST00000571263 PLXNA4Q9HCM2 1894 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 YJEFN3A6XGL0 299 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 SOBPA7XYQ1 873 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 HIDE1A8MVS5 230 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 E7ENQ6 273 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 PSTPIP1O43586 416 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 CLASP2O75122 1294 aaKnown RBP12.47□□□□□ -0.41
CDRT1-206ENST00000571263 ENDOD1O94919 500 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 ARHGEF15O94989 841 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 NCAM1P13591 858 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 ATF6P18850 670 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 CTNNA2P26232 953 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 FLT3P36888 993 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 KPNA1P52294 538 aaPredicted RBP12.47□□□□□ -0.41
CDRT1-206ENST00000571263 TWF1Q12792 350 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 CCDC14Q49A88 953 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 BOLA3Q53S33 107 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 DCAF6Q58WW2 860 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 PPM1LQ5SGD2 360 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 SNX30Q5VWJ9 437 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 GPRIN1Q7Z2K8 1008 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 SCAMP5Q8TAC9 235 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 ZNF592Q92610 1267 aa12.47□□□□□ -0.41
CDRT1-206ENST00000571263 CENPIQ92674 756 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms