RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 LRRC38Q5VT99 294 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 ACAD10Q6JQN1 1059 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 ENDOVQ8N8Q3 282 aaKnown RBP7.33□□□□□ -1.24
CNOT1-216ENST00000569240 SMYD1Q8NB12 490 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 CLHC1Q8NHS4 586 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 PLEKHO2Q8TD55 490 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 ZNF333Q96JL9 665 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 KIAA1683Q9H0B3 1180 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 KIF28PB7ZC32 967 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 RGL2O15211 777 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 P4HBP07237 508 aaKnown RBP7.33□□□□□ -1.24
CNOT1-216ENST00000569240 VCLP18206 1134 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 FRG1Q14331 258 aaKnown RBP7.33□□□□□ -1.24
CNOT1-216ENST00000569240 HERC3Q15034 1050 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 TBC1D10BQ4KMP7 808 aaPredicted RBP7.33□□□□□ -1.24
CNOT1-216ENST00000569240 ATP13A5Q4VNC0 1218 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 PPP1R15BQ5SWA1 713 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 HEATR4Q86WZ0 1026 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 COLGALT2Q8IYK4 626 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 TLCD1Q96CP7 247 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 BIRC8Q96P09 236 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 FSD1LQ9BXM9 530 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 TASP1Q9H6P5 420 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 LGALS13Q9UHV8 139 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 ANAPC2Q9UJX6 822 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 UBE2QL1A1L167 161 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 ISPDA4D126 451 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 H7C1W4 665 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 UBDO15205 165 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 SESN2P58004 480 aaPredicted RBP7.33□□□□□ -1.24
CNOT1-216ENST00000569240 COX10Q12887 443 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 EPHA7Q15375 998 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 C6orf52Q5T4I8 152 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 CACHD1Q5VU97 1274 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 RIPOR1Q6ZS17 1223 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 TDRPQ86YL5 185 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 TSEN2Q8NCE0 465 aaKnown RBP7.33□□□□□ -1.24
CNOT1-216ENST00000569240 SPATA17Q96L03 361 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 KLHL32Q96NJ5 620 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 POLR1BQ9H9Y6 1135 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 TTLL3Q9Y4R7 772 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 PPME1Q9Y570 386 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 PSMB9P28065 219 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 C11orf91Q3C1V1 193 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 INO80DQ53TQ3 878 aaPredicted RBP7.33□□□□□ -1.24
CNOT1-216ENST00000569240 HELQQ8TDG4 1101 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 TOP1MTQ969P6 601 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 SMARCAD1Q9H4L7 1026 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 TMEM165Q9HC07 324 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 STOX2Q9P2F5 926 aaPredicted RBP7.33□□□□□ -1.24
CNOT1-216ENST00000569240 KIAA1257Q9ULG3 409 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 SYNPO2Q9UMS6 1093 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 TRPM1Q7Z4N2 1603 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 RGSL1A5PLK6 1076 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 TRIM64CA6NLI5 447 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 HAT1O14929 419 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 GSC2O15499 205 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 TCEA3O75764 348 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 APOL3O95236 402 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 ASLP04424 464 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 YES1P07947 543 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 FECHP22830 423 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 USP10Q14694 798 aaKnown RBP7.33□□□□□ -1.24
CNOT1-216ENST00000569240 KLHL17Q6TDP4 642 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 CYP4Z1Q86W10 505 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 CCDC28AQ8IWP9 274 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 TBC1D21Q8IYX1 336 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 IL17REQ8NFR9 667 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 C7orf26Q96N11 449 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 TUBA1CQ9BQE3 449 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 SLC6A15Q9H2J7 730 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 FIS1Q9Y3D6 152 aa7.33□□□□□ -1.24
CNOT1-216ENST00000569240 ZMYM2Q9UBW7 1377 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 UTYO14607 1347 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 LOC100653049A0A140TA62 436 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 FAM172BPA6NC97 362 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 SDR42E2A6NKP2 422 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 MEI4A8MW99 385 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 H0YJX3 145 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 SYNCRIPO60506 623 aaKnown RBP7.32□□□□□ -1.24
CNOT1-216ENST00000569240 KRT34O76011 436 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 HIRAP54198 1017 aaPredicted RBP7.32□□□□□ -1.24
CNOT1-216ENST00000569240 HPCAP84074 193 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 EIF2B5Q13144 721 aaKnown RBP7.32□□□□□ -1.24
CNOT1-216ENST00000569240 SLC39A6Q13433 755 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 KHDRBS2Q5VWX1 349 aaKnown RBP7.32□□□□□ -1.24
CNOT1-216ENST00000569240 ARHGAP17Q68EM7 881 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 FEZF2Q8TBJ5 459 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 JDP2Q8WYK2 163 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 ZHX1-C8orf76Q96EF9 292 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 TBCBQ99426 244 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 APOL2Q9BQE5 337 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 LRRC40Q9H9A6 602 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 AS3MTQ9HBK9 375 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 TMEM8AQ9HCN3 771 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.32□□□□□ -1.24
CNOT1-216ENST00000569240 IGSF9Q9P2J2 1179 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 TRIM10Q9UDY6 481 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 SPATA2Q9UM82 520 aa7.32□□□□□ -1.24
CNOT1-216ENST00000569240 RBM47A0AV96 593 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms