RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 WEE2P0C1S8 567 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 LINC00271P0C7V0 271 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 P4HA1P13674 534 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 TRIM21P19474 475 aaKnown RBP8.26□□□□□ -1.09
SMG1-214ENST00000568038 CTNNB1P35222 781 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 BMPR1AP36894 532 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 PBX1P40424 430 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 RAP1GAPP47736 663 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 CDH8P55286 799 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 POLR2FP61218 127 aaKnown RBP8.26□□□□□ -1.09
SMG1-214ENST00000568038 RAPGEF1Q13905 1077 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 RAB30Q15771 203 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 ARHGAP44Q17R89 818 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 DPY19L2P1Q6NXN4 242 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 FUT10Q6P4F1 479 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 OGFOD3Q6PK18 319 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 TMC6Q7Z403 805 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 CEP57Q86XR8 500 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 VSTM4Q8IW00 320 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 SULF2Q8IWU5 870 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 DRC7Q8IY82 874 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 SLC39A11Q8N1S5 342 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 FLCNQ8NFG4 579 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 STK35Q8TDR2 534 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 CPLX3Q8WVH0 158 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 TAF4BQ92750 862 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 KAT5Q92993 513 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 IGSF21Q96ID5 467 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 C17orf80Q9BSJ5 609 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 GPR62Q9BZJ7 368 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 GANQ9H2C0 597 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 PRO3102Q9H379 93 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 SMYD3Q9H7B4 428 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 NLRC4Q9NPP4 1024 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 DNAJC12Q9UKB3 198 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 AJAP1Q9UKB5 411 aaPredicted RBP8.26□□□□□ -1.09
SMG1-214ENST00000568038 ADAM28Q9UKQ2 775 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 MTUS1Q9ULD2 1270 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 TIMM13Q9Y5L4 95 aaPredicted RBP8.26□□□□□ -1.09
SMG1-214ENST00000568038 FHOD1Q9Y613 1164 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 TRAPPC3O43617 180 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 FGF18O76093 207 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 CSPG5O95196 566 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 UCHL3P15374 230 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 CD58P19256 250 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 TBXAS1P24557 533 aaPredicted RBP8.25□□□□□ -1.09
SMG1-214ENST00000568038 TKTP29401 623 aaKnown RBP8.25□□□□□ -1.09
SMG1-214ENST00000568038 AARSP49588 968 aaKnown RBP eCLIP8.25□□□□□ -1.09
SMG1-214ENST00000568038 MFAP3P55082 362 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 TAP1Q03518 808 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 KRT17Q04695 432 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 CUL2Q13617 745 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 SOWAHAQ2M3V2 549 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 FAM171A1Q5VUB5 890 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 WSCD1Q658N2 575 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 SPECC1LQ69YQ0 1117 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 IQCEQ6IPM2 695 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 TAS1R1Q7RTX1 841 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 PDCL2Q8N4E4 241 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 SPC24Q8NBT2 197 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 APPL2Q8NEU8 664 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 TMEM169Q96HH4 297 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 MRFAP1L1Q96HT8 127 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 B3GALT6Q96L58 329 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 KREMEN1Q96MU8 473 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 TGS1Q96RS0 853 aaKnown RBP8.25□□□□□ -1.09
SMG1-214ENST00000568038 NUP58Q9BVL2 599 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 SDCBP2Q9H190 292 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 CERS4Q9HA82 394 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 SSU72Q9NP77 194 aaKnown RBP8.25□□□□□ -1.09
SMG1-214ENST00000568038 PLCB1Q9NQ66 1216 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 GDAP2Q9NXN4 497 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 APEX2Q9UBZ4 518 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 L1RE1Q9UN81 338 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 RWDD3Q9Y3V2 267 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 RNF114Q9Y508 228 aa8.25□□□□□ -1.09
SMG1-214ENST00000568038 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.25□□□□□ -1.09
SMG1-214ENST00000568038 SF3B1O75533 1304 aaKnown RBP eCLIP8.25□□□□□ -1.09
SMG1-214ENST00000568038 GBF1Q92538 1859 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 M0QZQ0 153 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 HCRTO43612 131 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 PRNPP04156 253 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 PDGFRBP09619 1106 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 FAM87AP0C7U9 286 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 PNMA6AP0CW24 399 aaPredicted RBP8.24□□□□□ -1.09
SMG1-214ENST00000568038 ODC1P11926 461 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 PAX3P23760 479 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 ARNTP27540 789 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 PPM1AP35813 382 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 USP8P40818 1118 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 ERVK-21P61565 698 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 SMAD3P84022 425 aaKnown RBP8.24□□□□□ -1.09
SMG1-214ENST00000568038 GCNT1Q02742 428 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 GOLGA8FQ08AF8 430 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 GOLGA8DPQ0D2H9 430 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 ELAVL2Q12926 359 aaKnown RBP8.24□□□□□ -1.09
SMG1-214ENST00000568038 DRAP1Q14919 205 aaPredicted RBP8.24□□□□□ -1.09
SMG1-214ENST00000568038 CYP27C1Q4G0S4 372 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 ZNF394Q53GI3 561 aa8.24□□□□□ -1.09
SMG1-214ENST00000568038 KIAA1841Q6NSI8 718 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms