RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 NUP58Q9BVL2 599 aa27.47■■□□□ 1.99
NME3-209ENST00000566600 EDEM3Q9BZQ6 932 aa27.47■■□□□ 1.99
NME3-209ENST00000566600 NACA2Q9H009 215 aa27.47■■□□□ 1.99
NME3-209ENST00000566600 SMG9Q9H0W8 520 aaKnown RBP27.47■■□□□ 1.99
NME3-209ENST00000566600 ST7Q9NRC1 585 aa27.47■■□□□ 1.99
NME3-209ENST00000566600 THG1LQ9NWX6 298 aaKnown RBP27.47■■□□□ 1.99
NME3-209ENST00000566600 A0A1W2PQH9 124 aa27.46■■□□□ 1.99
NME3-209ENST00000566600 TLR5O60602 858 aa27.46■■□□□ 1.99
NME3-209ENST00000566600 LCP1P13796 627 aa27.46■■□□□ 1.99
NME3-209ENST00000566600 TCF3P15923 654 aa27.46■■□□□ 1.99
NME3-209ENST00000566600 SNX16P57768 344 aa27.46■■□□□ 1.99
NME3-209ENST00000566600 PFKPQ01813 784 aa27.46■■□□□ 1.99
NME3-209ENST00000566600 SIGLEC14Q08ET2 396 aa27.46■■□□□ 1.99
NME3-209ENST00000566600 IRGQQ8WZA9 623 aa27.46■■□□□ 1.99
NME3-209ENST00000566600 IQCDQ96DY2 449 aa27.46■■□□□ 1.99
NME3-209ENST00000566600 SLC4A5Q9BY07 1137 aa27.46■■□□□ 1.99
NME3-209ENST00000566600 RNF38Q9H0F5 515 aa27.46■■□□□ 1.99
NME3-209ENST00000566600 CCSER2Q9H7U1 834 aa27.46■■□□□ 1.99
NME3-209ENST00000566600 COCHO43405 550 aa27.45■■□□□ 1.98
NME3-209ENST00000566600 NARSO43776 548 aaKnown RBP27.45■■□□□ 1.98
NME3-209ENST00000566600 CFHP08603 1231 aa27.45■■□□□ 1.98
NME3-209ENST00000566600 MBL2P11226 248 aaPredicted RBP27.45■■□□□ 1.98
NME3-209ENST00000566600 RARGP13631 454 aa27.45■■□□□ 1.98
NME3-209ENST00000566600 YWHAGP61981 247 aaKnown RBP eCLIP27.45■■□□□ 1.98
NME3-209ENST00000566600 GPC5P78333 572 aa27.45■■□□□ 1.98
NME3-209ENST00000566600 GRM2Q14416 872 aa27.45■■□□□ 1.98
NME3-209ENST00000566600 ARHGAP29Q52LW3 1261 aa27.45■■□□□ 1.98
NME3-209ENST00000566600 FIGNQ5HY92 759 aa27.45■■□□□ 1.98
NME3-209ENST00000566600 SCD5Q86SK9 330 aa27.45■■□□□ 1.98
NME3-209ENST00000566600 DDX42Q86XP3 938 aaKnown RBP eCLIP27.45■■□□□ 1.98
NME3-209ENST00000566600 EPS8L1Q8TE68 723 aa27.45■■□□□ 1.98
NME3-209ENST00000566600 IRF7Q92985 503 aa27.45■■□□□ 1.98
NME3-209ENST00000566600 BRD9Q9H8M2 597 aa27.45■■□□□ 1.98
NME3-209ENST00000566600 NMUR1Q9HB89 426 aa27.45■■□□□ 1.98
NME3-209ENST00000566600 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.45■■□□□ 1.98
NME3-209ENST00000566600 CCL26Q9Y258 94 aa27.45■■□□□ 1.98
NME3-209ENST00000566600 ZNF263O14978 683 aa27.44■■□□□ 1.98
NME3-209ENST00000566600 CHADO15335 359 aa27.44■■□□□ 1.98
NME3-209ENST00000566600 SART1O43290 800 aaKnown RBP27.44■■□□□ 1.98
NME3-209ENST00000566600 FERP16591 822 aa27.44■■□□□ 1.98
NME3-209ENST00000566600 GDI1P31150 447 aa27.44■■□□□ 1.98
NME3-209ENST00000566600 ATP5C1P36542 298 aaKnown RBP27.44■■□□□ 1.98
NME3-209ENST00000566600 PBX1P40424 430 aa27.44■■□□□ 1.98
NME3-209ENST00000566600 PLCB2Q00722 1185 aa27.44■■□□□ 1.98
NME3-209ENST00000566600 PDCLQ13371 301 aa27.44■■□□□ 1.98
NME3-209ENST00000566600 CC2D1AQ6P1N0 951 aaPredicted RBP27.44■■□□□ 1.98
NME3-209ENST00000566600 KLHDC10Q6PID8 442 aa27.44■■□□□ 1.98
NME3-209ENST00000566600 TRIM67Q6ZTA4 783 aa27.44■■□□□ 1.98
NME3-209ENST00000566600 NOP9Q86U38 636 aaKnown RBP27.44■■□□□ 1.98
NME3-209ENST00000566600 PASD1Q8IV76 773 aa27.44■■□□□ 1.98
NME3-209ENST00000566600 TMEM35BQ8NCS4 154 aa27.44■■□□□ 1.98
NME3-209ENST00000566600 DDX1Q92499 740 aaKnown RBP27.44■■□□□ 1.98
NME3-209ENST00000566600 XPO4Q9C0E2 1151 aaKnown RBP27.44■■□□□ 1.98
NME3-209ENST00000566600 SMOC2Q9H3U7 446 aa27.44■■□□□ 1.98
NME3-209ENST00000566600 WNT16Q9UBV4 365 aa27.44■■□□□ 1.98
NME3-209ENST00000566600 LSM8O95777 96 aaKnown RBP27.43■■□□□ 1.98
NME3-209ENST00000566600 PGFP49763 221 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 DAOAP59103 153 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 BTBD8Q5XKL5 378 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 TMEM110Q86TL2 294 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 WDTC1Q8N5D0 677 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 KIAA1958Q8N8K9 716 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 SH3RF2Q8TEC5 729 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 GOLGA1Q92805 767 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 DNASE1L2Q92874 299 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 LRRC3BQ96PB8 259 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 EPHX3Q9H6B9 360 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 TRPV5Q9NQA5 729 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 OSER1Q9NX31 292 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 NOCTQ9UK39 431 aaKnown RBP27.43■■□□□ 1.98
NME3-209ENST00000566600 FBXL21Q9UKT6 434 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 CPQQ9Y646 472 aa27.43■■□□□ 1.98
NME3-209ENST00000566600 GABBR2O75899 941 aa27.42■■□□□ 1.98
NME3-209ENST00000566600 CDR2Q01850 454 aa27.42■■□□□ 1.98
NME3-209ENST00000566600 USP4Q13107 963 aa27.42■■□□□ 1.98
NME3-209ENST00000566600 ZNF77Q15935 545 aa27.42■■□□□ 1.98
NME3-209ENST00000566600 C10orf120Q5SQS8 335 aa27.42■■□□□ 1.98
NME3-209ENST00000566600 TAF3Q5VWG9 929 aa27.42■■□□□ 1.98
NME3-209ENST00000566600 BAP1Q92560 729 aa27.42■■□□□ 1.98
NME3-209ENST00000566600 PPP1R13BQ96KQ4 1090 aa27.42■■□□□ 1.98
NME3-209ENST00000566600 CYTH4Q9UIA0 394 aa27.42■■□□□ 1.98
NME3-209ENST00000566600 DNMT3LQ9UJW3 386 aa27.42■■□□□ 1.98
NME3-209ENST00000566600 HELZP42694 1942 aaKnown RBP27.41■■□□□ 1.98
NME3-209ENST00000566600 PIK3R2O00459 728 aa27.41■■□□□ 1.98
NME3-209ENST00000566600 CDH5P33151 784 aaPredicted RBP27.41■■□□□ 1.98
NME3-209ENST00000566600 ARID5AQ03989 594 aa27.41■■□□□ 1.98
NME3-209ENST00000566600 MTF1Q14872 753 aa27.41■■□□□ 1.98
NME3-209ENST00000566600 RSRC2Q7L4I2 434 aaKnown RBP27.41■■□□□ 1.98
NME3-209ENST00000566600 SCUBE3Q8IX30 993 aa27.41■■□□□ 1.98
NME3-209ENST00000566600 C1orf131Q8NDD1 294 aaKnown RBP27.41■■□□□ 1.98
NME3-209ENST00000566600 TRIM62Q9BVG3 475 aa27.41■■□□□ 1.98
NME3-209ENST00000566600 TTYH3Q9C0H2 523 aa27.41■■□□□ 1.98
NME3-209ENST00000566600 MIS12Q9H081 205 aa27.41■■□□□ 1.98
NME3-209ENST00000566600 ABCC13Q9NSE7 274 aa27.41■■□□□ 1.98
NME3-209ENST00000566600 OLA1Q9NTK5 396 aaKnown RBP27.41■■□□□ 1.98
NME3-209ENST00000566600 MUC3AQ02505 3323 aa27.41■■□□□ 1.98
NME3-209ENST00000566600 A0A1W2PQJ5 194 aa27.4■■□□□ 1.98
NME3-209ENST00000566600 YJEFN3A6XGL0 299 aa27.4■■□□□ 1.98
NME3-209ENST00000566600 E5RJQ4 531 aa27.4■■□□□ 1.98
NME3-209ENST00000566600 E7ENQ6 273 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms