RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 A0A1W2PQH9 124 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 HHLA1C9JL84 531 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 TRDMT1O14717 391 aaKnown RBP14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 MDM4O15151 490 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 TLR5O60602 858 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 TBX18O95935 607 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 CYP17A1P05093 508 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 PXNP49023 591 aaPredicted RBP14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 RAD23BP54727 409 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 GOLGA7BQ2TAP0 167 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 CCDC183Q5T5S1 534 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 DCLK2Q8N568 766 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 IER2Q9BTL4 223 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 SRRTQ9BXP5 876 aaKnown RBP14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 DUSP16Q9BY84 665 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 NMUR1Q9HB89 426 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 TLR8Q9NR97 1041 aaKnown RBP14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 COMMD8Q9NX08 183 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 IL37Q9NZH6 218 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 PCDHGA2Q9Y5H1 932 aa14.38□□□□□ -0.11
VPS9D1-204ENST00000565023 KIAA1549LQ6ZVL6 1849 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 TCF3P15923 654 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 SEC13P55735 322 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 SRSF5Q13243 272 aaKnown RBP14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 CT47A1Q5JQC4 288 aaPredicted RBP14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 PRR23BQ6ZRT6 265 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 ERMP1Q7Z2K6 904 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 DDX42Q86XP3 938 aaKnown RBP eCLIP14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 KAT5Q92993 513 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 EXOC4Q96A65 974 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 NT5C1BQ96P26 610 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 SEMA4AQ9H3S1 761 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 OSER1Q9NX31 292 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 TMEM63CQ9P1W3 806 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 NCDNQ9UBB6 729 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 NAGPAQ9UK23 515 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 COQ4Q9Y3A0 265 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 PCDHB4Q9Y5E5 795 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 ZFHX4Q86UP3 3567 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 CACNA1GO43497 2377 aa14.37□□□□□ -0.11
VPS9D1-204ENST00000565023 NCOR2Q9Y618 2525 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 FAM92AA1XBS5 289 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 ANTXRLA6NF34 631 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 SLC9A3R1O14745 358 aaPredicted RBP14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 GNA14O95837 355 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 CALCAP01258 141 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 ZDHHC11BP0C7U3 371 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 TDGF1P13385 188 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 RARGP13631 454 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 DRD1P21728 446 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 ERCC5P28715 1186 aaPredicted RBP14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 SLC6A11P48066 632 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 NRLP54845 237 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 MARSP56192 900 aaKnown RBP14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 YWHAEP62258 255 aaKnown RBP14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 KDSRQ06136 332 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 DHCR24Q15392 516 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 SGO2Q562F6 1265 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 PPM1KQ8N3J5 372 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 TTC39CQ8N584 583 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 NAT16Q8N8M0 369 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 ZBTB44Q8NCP5 570 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 RPLP0P6Q8NHW5 317 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 ZFRQ96KR1 1074 aaKnown RBP14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 DACH1Q9UI36 760 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 TSPAN16Q9UKR8 245 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 SMG5Q9UPR3 1016 aaKnown RBP14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 SCML2Q9UQR0 700 aa14.36□□□□□ -0.11
VPS9D1-204ENST00000565023 K7ESF4 209 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 FGFR1OPO95684 399 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 PTMSP20962 102 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 ATP5C1P36542 298 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 OPRD1P41143 372 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 KIF11P52732 1056 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 CETN1Q12798 172 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 KCNH2Q12809 1159 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 ANO4Q32M45 955 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 C10orf120Q5SQS8 335 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 LY6G5CQ5SRR4 150 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 SNX30Q5VWJ9 437 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 ARHGAP17Q68EM7 881 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 TMEM270Q6UE05 265 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 RRAGAQ7L523 313 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 PIGZQ86VD9 579 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 C12orf40Q86WS4 652 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 TTC30AQ86WT1 665 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 ARHGEF19Q8IW93 802 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 BBS7Q8IWZ6 715 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 KIAA2013Q8IYS2 634 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 ADGRG2Q8IZP9 1017 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 SYNPOQ8N3V7 929 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 SUMF1Q8NBK3 374 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 UBA3Q8TBC4 463 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 EZH1Q92800 747 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 HHIPQ96QV1 700 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 TBC1D14Q9P2M4 693 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 HESX1Q9UBX0 185 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 RASAL2Q9UJF2 1139 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 SLC8A2Q9UPR5 921 aa14.35□□□□□ -0.11
VPS9D1-204ENST00000565023 RALGAPA1Q6GYQ0 2036 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms