RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 SEC31AO94979 1220 aaKnown RBP16.25■□□□□ 0.19
COMMD4-210ENST00000564587 ZBED1O96006 694 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 TIMP1P01033 207 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 GALTP07902 379 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 FGFR3P22607 806 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 AIF1P55008 147 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 ATP11AP98196 1134 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 MRPL58Q14197 206 aaKnown RBP16.25■□□□□ 0.19
COMMD4-210ENST00000564587 HLTFQ14527 1009 aaKnown RBP eCLIP16.25■□□□□ 0.19
COMMD4-210ENST00000564587 KRT81Q14533 505 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 TAF5Q15542 800 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 CDO1Q16878 200 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 C15orf59Q2T9L4 293 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-210ENST00000564587 HABP4Q5JVS0 413 aaKnown RBP16.25■□□□□ 0.19
COMMD4-210ENST00000564587 VARS2Q5ST30 1063 aaKnown RBP16.25■□□□□ 0.19
COMMD4-210ENST00000564587 DUPD1Q68J44 220 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 TXNRD3NBQ6F5E7 133 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 PM20D1Q6GTS8 502 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 BBS12Q6ZW61 710 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 DEFB106AQ8N104 65 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 ZMIZ2Q8NF64 920 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 OR10T2Q8NGX3 314 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 DIS3LQ8TF46 1054 aaKnown RBP16.25■□□□□ 0.19
COMMD4-210ENST00000564587 NT5C3BQ969T7 300 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 PAWRQ96IZ0 340 aaKnown RBP16.25■□□□□ 0.19
COMMD4-210ENST00000564587 ULBP1Q9BZM6 244 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 HHLA1C9JL84 531 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 CAPN9O14815 690 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 TRIM66O15016 1216 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 F9P00740 461 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 AMHP03971 560 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 BDNFP23560 247 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 MAGEA11P43364 429 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 TNNT3P45378 269 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-210ENST00000564587 SLC11A1P49279 550 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 CARSP49589 748 aaKnown RBP16.24■□□□□ 0.19
COMMD4-210ENST00000564587 CDH6P55285 790 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 MRPS25P82663 173 aaKnown RBP16.24■□□□□ 0.19
COMMD4-210ENST00000564587 CASP8Q14790 479 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 PPP1R7Q15435 360 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 TCTN1Q2MV58 587 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 ERMARDQ5T6L9 678 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 FAM171A1Q5VUB5 890 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 SCYL2Q6P3W7 929 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 FUT10Q6P4F1 479 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 LRRTM3Q86VH5 581 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 TMEM199Q8N511 208 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 BBOF1Q8ND07 529 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 FAM71BQ8TC56 605 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 CLEC4CQ8WTT0 213 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 C2orf15Q8WU43 125 aaKnown RBP16.24■□□□□ 0.19
COMMD4-210ENST00000564587 C1orf54Q8WWF1 131 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 HSPH1Q92598 858 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 SLC9A7Q96T83 725 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 NFU1Q9UMS0 254 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 PCDHB5Q9Y5E4 795 aa16.24■□□□□ 0.19
COMMD4-210ENST00000564587 FNDC1Q4ZHG4 1894 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-210ENST00000564587 PTPRDP23468 1912 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 DGKIO75912 1065 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 LTFP02788 710 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 ZFXP17010 805 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-210ENST00000564587 ALDH7A1P49419 539 aaKnown RBP16.23■□□□□ 0.19
COMMD4-210ENST00000564587 SULT1E1P49888 294 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 ARSEP51690 589 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 HDAC4P56524 1084 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 PTK6Q13882 451 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 CCDC142Q17RM4 750 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 SMTNL2Q2TAL5 461 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 CTXN3Q4LDR2 81 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 DCAF6Q58WW2 860 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 KCNT1Q5JUK3 1230 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 KAZNQ674X7 775 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 TTC27Q6P3X3 843 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 ANKS3Q6ZW76 656 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 MREGQ8N565 214 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 CCDC89Q8N998 374 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 NKD2Q969F2 451 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-210ENST00000564587 LRRC45Q96CN5 670 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 PKNOX2Q96KN3 472 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 C8orf48Q96LL4 319 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 KCNK16Q96T55 309 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 NPY6RQ99463 290 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 ZNF670Q9BS34 389 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 CHST7Q9NS84 486 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.23■□□□□ 0.19
COMMD4-210ENST00000564587 TMLHEQ9NVH6 421 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 KLHL11Q9NVR0 708 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 MARCH5Q9NX47 278 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 OGFRQ9NZT2 677 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 RCOR3Q9P2K3 495 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-210ENST00000564587 USP3Q9Y6I4 520 aa16.23■□□□□ 0.19
COMMD4-210ENST00000564587 APOC4-APOC2K7ER74 178 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 DAPK3O43293 454 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 LIASO43766 372 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 CST8O60676 142 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 BAIAP3O94812 1187 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 APOC2P02655 101 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 MYBL2P10244 700 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 KRT10P13645 584 aa16.22■□□□□ 0.19
COMMD4-210ENST00000564587 RAG1P15918 1043 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms