RNA–Protein interactions for RNA: ENST00000561660.1

FANCA-206, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-206ENST00000561660 SCD5Q86SK9 330 aa18.99■□□□□ 0.63
FANCA-206ENST00000561660 P2RY13Q9BPV8 354 aa18.99■□□□□ 0.63
FANCA-206ENST00000561660 SEMA4AQ9H3S1 761 aa18.99■□□□□ 0.63
FANCA-206ENST00000561660 CLSTN2Q9H4D0 955 aa18.99■□□□□ 0.63
FANCA-206ENST00000561660 TLR8Q9NR97 1041 aaKnown RBP18.99■□□□□ 0.63
FANCA-206ENST00000561660 PCDHGA2Q9Y5H1 932 aa18.99■□□□□ 0.63
FANCA-206ENST00000561660 FANCMQ8IYD8 2048 aa18.99■□□□□ 0.63
FANCA-206ENST00000561660 HELZP42694 1942 aaKnown RBP18.98■□□□□ 0.63
FANCA-206ENST00000561660 A0A1W2PQH9 124 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 ANTXRLA6NF34 631 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 TULP2O00295 520 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 P4HA2O15460 535 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 GREM1O60565 184 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 PAPSS2O95340 614 aaPredicted RBP18.98■□□□□ 0.63
FANCA-206ENST00000561660 NFATC1O95644 943 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 LMNAP02545 664 aaKnown RBP18.98■□□□□ 0.63
FANCA-206ENST00000561660 OPRD1P41143 372 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 AMPD2Q01433 879 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 KCNH2Q12809 1159 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 DHCR24Q15392 516 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 RHBDF2Q6PJF5 856 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 ANKRD52Q8NB46 1076 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 SUMF1Q8NBK3 374 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 KLF16Q9BXK1 252 aaPredicted RBP18.98■□□□□ 0.63
FANCA-206ENST00000561660 UBXN6Q9BZV1 441 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 CYLDQ9NQC7 956 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 POLR3BQ9NW08 1133 aaPredicted RBP18.98■□□□□ 0.63
FANCA-206ENST00000561660 RWDD2AQ9UIY3 292 aa18.98■□□□□ 0.63
FANCA-206ENST00000561660 E2F8A0AVK6 867 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 RNF225M0QZC1 329 aaPredicted RBP18.97■□□□□ 0.63
FANCA-206ENST00000561660 GNA14O95837 355 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 DRD1P21728 446 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 TBXAS1P24557 533 aaPredicted RBP18.97■□□□□ 0.63
FANCA-206ENST00000561660 MESP2Q0VG99 397 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 RAB41Q5JT25 222 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 CCDC186Q7Z3E2 898 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 PIGZQ86VD9 579 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 DDX42Q86XP3 938 aaKnown RBP eCLIP18.97■□□□□ 0.63
FANCA-206ENST00000561660 IRF2BP1Q8IU81 584 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 ARHGEF19Q8IW93 802 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 EHBP1Q8NDI1 1231 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 ATRIPQ8WXE1 791 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 TFAP2BQ92481 460 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 CD101Q93033 1021 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 NT5C1BQ96P26 610 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 ZSWIM1Q9BR11 485 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 DNAI2Q9GZS0 605 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.97■□□□□ 0.63
FANCA-206ENST00000561660 NUDT5Q9UKK9 219 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 TSPAN16Q9UKR8 245 aa18.97■□□□□ 0.63
FANCA-206ENST00000561660 MDM4O15151 490 aa18.96■□□□□ 0.63
FANCA-206ENST00000561660 RNF40O75150 1001 aa18.96■□□□□ 0.63
FANCA-206ENST00000561660 CALCAP01258 141 aa18.96■□□□□ 0.63
FANCA-206ENST00000561660 RARGP13631 454 aa18.96■□□□□ 0.63
FANCA-206ENST00000561660 SLC6A11P48066 632 aa18.96■□□□□ 0.63
FANCA-206ENST00000561660 NR1H3Q13133 447 aa18.96■□□□□ 0.63
FANCA-206ENST00000561660 GOLGA7BQ2TAP0 167 aa18.96■□□□□ 0.63
FANCA-206ENST00000561660 RRAGAQ7L523 313 aa18.96■□□□□ 0.63
FANCA-206ENST00000561660 C12orf40Q86WS4 652 aa18.96■□□□□ 0.63
FANCA-206ENST00000561660 BBS7Q8IWZ6 715 aa18.96■□□□□ 0.63
FANCA-206ENST00000561660 FAM126AQ9BYI3 521 aaPredicted RBP18.96■□□□□ 0.63
FANCA-206ENST00000561660 LMBRD1Q9NUN5 540 aa18.96■□□□□ 0.63
FANCA-206ENST00000561660 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.96■□□□□ 0.63
FANCA-206ENST00000561660 O00370 1275 aa18.95■□□□□ 0.62
FANCA-206ENST00000561660 SLC9A3R1O14745 358 aaPredicted RBP18.95■□□□□ 0.62
FANCA-206ENST00000561660 AFPP02771 609 aaKnown RBP18.95■□□□□ 0.62
FANCA-206ENST00000561660 IRF1P10914 325 aa18.95■□□□□ 0.62
FANCA-206ENST00000561660 VDRP11473 427 aa18.95■□□□□ 0.62
FANCA-206ENST00000561660 CD19P15391 556 aa18.95■□□□□ 0.62
FANCA-206ENST00000561660 YWHAEP62258 255 aaKnown RBP18.95■□□□□ 0.62
FANCA-206ENST00000561660 PDE4CQ08493 712 aa18.95■□□□□ 0.62
FANCA-206ENST00000561660 PKDCCQ504Y2 493 aa18.95■□□□□ 0.62
FANCA-206ENST00000561660 SGO2Q562F6 1265 aa18.95■□□□□ 0.62
FANCA-206ENST00000561660 TMEM270Q6UE05 265 aa18.95■□□□□ 0.62
FANCA-206ENST00000561660 BHLHA9Q7RTU4 235 aa18.95■□□□□ 0.62
FANCA-206ENST00000561660 SFTPA1Q8IWL2 248 aa18.95■□□□□ 0.62
FANCA-206ENST00000561660 PPM1KQ8N3J5 372 aa18.95■□□□□ 0.62
FANCA-206ENST00000561660 KREMEN1Q96MU8 473 aa18.95■□□□□ 0.62
FANCA-206ENST00000561660 MYH10P35580 1976 aa18.95■□□□□ 0.62
FANCA-206ENST00000561660 CHURC1-FNTBB4DL54 471 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 K7EQS6 105 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 ATP5C1P36542 298 aaKnown RBP18.94■□□□□ 0.62
FANCA-206ENST00000561660 FNTBP49356 437 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 CETN1Q12798 172 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 LY6G5CQ5SRR4 150 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 KLHDC10Q6PID8 442 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 MLKLQ8NB16 471 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 UBA3Q8TBC4 463 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 NDRG1Q92597 394 aaKnown RBP18.94■□□□□ 0.62
FANCA-206ENST00000561660 CNOT6LQ96LI5 555 aaKnown RBP18.94■□□□□ 0.62
FANCA-206ENST00000561660 NACA2Q9H009 215 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 INTS2Q9H0H0 1204 aaKnown RBP18.94■□□□□ 0.62
FANCA-206ENST00000561660 EPC1Q9H2F5 836 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 TBC1D14Q9P2M4 693 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 NAGPAQ9UK23 515 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 SH3BP1Q9Y3L3 701 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 PCDHB4Q9Y5E5 795 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 SPTBN4Q9H254 2564 aa18.94■□□□□ 0.62
FANCA-206ENST00000561660 ATG2BQ96BY7 2078 aa18.93■□□□□ 0.62
FANCA-206ENST00000561660 XPO1O14980 1071 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms