RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 NT5C1AQ9BXI3 368 aa16.88■□□□□ 0.29
LMX1B-204ENST00000561065 OSER1Q9NX31 292 aa16.88■□□□□ 0.29
LMX1B-204ENST00000561065 GADD45BO75293 160 aaPredicted RBP16.87■□□□□ 0.29
LMX1B-204ENST00000561065 AMPD2Q01433 879 aa16.87■□□□□ 0.29
LMX1B-204ENST00000561065 CETN1Q12798 172 aa16.87■□□□□ 0.29
LMX1B-204ENST00000561065 DHCR24Q15392 516 aa16.87■□□□□ 0.29
LMX1B-204ENST00000561065 ZNF394Q53GI3 561 aa16.87■□□□□ 0.29
LMX1B-204ENST00000561065 DCAF17Q5H9S7 520 aaPredicted RBP16.87■□□□□ 0.29
LMX1B-204ENST00000561065 HECTD3Q5T447 861 aa16.87■□□□□ 0.29
LMX1B-204ENST00000561065 KIAA1958Q8N8K9 716 aa16.87■□□□□ 0.29
LMX1B-204ENST00000561065 FBXL13Q8NEE6 735 aa16.87■□□□□ 0.29
LMX1B-204ENST00000561065 CYFIP2Q96F07 1278 aa16.87■□□□□ 0.29
LMX1B-204ENST00000561065 NMUR1Q9HB89 426 aa16.87■□□□□ 0.29
LMX1B-204ENST00000561065 COMMD8Q9NX08 183 aa16.87■□□□□ 0.29
LMX1B-204ENST00000561065 ARMCX3Q9UH62 379 aaPredicted RBP16.87■□□□□ 0.29
LMX1B-204ENST00000561065 GREM1O60565 184 aa16.86■□□□□ 0.29
LMX1B-204ENST00000561065 TLR5O60602 858 aa16.86■□□□□ 0.29
LMX1B-204ENST00000561065 GNA14O95837 355 aa16.86■□□□□ 0.29
LMX1B-204ENST00000561065 TBX18O95935 607 aa16.86■□□□□ 0.29
LMX1B-204ENST00000561065 BMP6P22004 513 aa16.86■□□□□ 0.29
LMX1B-204ENST00000561065 SIM2Q14190 667 aaPredicted RBP16.86■□□□□ 0.29
LMX1B-204ENST00000561065 FBXO43Q4G163 708 aa16.86■□□□□ 0.29
LMX1B-204ENST00000561065 PPP1R26Q5T8A7 1209 aaPredicted RBP16.86■□□□□ 0.29
LMX1B-204ENST00000561065 ISM2Q6H9L7 571 aa16.86■□□□□ 0.29
LMX1B-204ENST00000561065 RHBDF2Q6PJF5 856 aa16.86■□□□□ 0.29
LMX1B-204ENST00000561065 ADGRG2Q8IZP9 1017 aa16.86■□□□□ 0.29
LMX1B-204ENST00000561065 TATDN2Q93075 761 aa16.86■□□□□ 0.29
LMX1B-204ENST00000561065 CEP63Q96MT8 703 aa16.86■□□□□ 0.29
LMX1B-204ENST00000561065 FAM124BQ9H5Z6 455 aaPredicted RBP16.86■□□□□ 0.29
LMX1B-204ENST00000561065 RAB20Q9NX57 234 aa16.86■□□□□ 0.29
LMX1B-204ENST00000561065 MAN1B1Q9UKM7 699 aa16.86■□□□□ 0.29
LMX1B-204ENST00000561065 SDK1Q7Z5N4 2213 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 K7EQS6 105 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 IRF1P10914 325 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 SLC6A11P48066 632 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 RAD23BP54727 409 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 NR1H3Q13133 447 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 TCERG1LQ5VWI1 586 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 LAIR1Q6GTX8 287 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 DDX42Q86XP3 938 aaKnown RBP eCLIP16.85■□□□□ 0.29
LMX1B-204ENST00000561065 BBS7Q8IWZ6 715 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 PHTF2Q8N3S3 785 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 SLC4A11Q8NBS3 891 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 SLC35C1Q96A29 364 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 CYLDQ9NQC7 956 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 CISHQ9NSE2 258 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 KIAA1468Q9P260 1216 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 GMEB2Q9UKD1 530 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 SCML2Q9UQR0 700 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 COQ4Q9Y3A0 265 aa16.85■□□□□ 0.29
LMX1B-204ENST00000561065 E2F8A0AVK6 867 aa16.84■□□□□ 0.29
LMX1B-204ENST00000561065 MDM4O15151 490 aa16.84■□□□□ 0.29
LMX1B-204ENST00000561065 ACO1P21399 889 aaKnown RBP16.84■□□□□ 0.29
LMX1B-204ENST00000561065 CNR2P34972 360 aa16.84■□□□□ 0.29
LMX1B-204ENST00000561065 SEC13P55735 322 aa16.84■□□□□ 0.29
LMX1B-204ENST00000561065 DMC1Q14565 340 aa16.84■□□□□ 0.29
LMX1B-204ENST00000561065 LY6G5CQ5SRR4 150 aa16.84■□□□□ 0.29
LMX1B-204ENST00000561065 CLEC17AQ6ZS10 378 aa16.84■□□□□ 0.29
LMX1B-204ENST00000561065 SYT13Q7L8C5 426 aa16.84■□□□□ 0.29
LMX1B-204ENST00000561065 FAM160A2Q8N612 972 aaPredicted RBP16.84■□□□□ 0.29
LMX1B-204ENST00000561065 USP33Q8TEY7 942 aa16.84■□□□□ 0.29
LMX1B-204ENST00000561065 FBXO44Q9H4M3 255 aa16.84■□□□□ 0.29
LMX1B-204ENST00000561065 PNPLA8Q9NP80 782 aa16.84■□□□□ 0.29
LMX1B-204ENST00000561065 NUDT5Q9UKK9 219 aa16.84■□□□□ 0.29
LMX1B-204ENST00000561065 RAB23Q9ULC3 237 aa16.84■□□□□ 0.29
LMX1B-204ENST00000561065 SLC8A2Q9UPR5 921 aa16.84■□□□□ 0.29
LMX1B-204ENST00000561065 MYO18AQ92614 2054 aaKnown RBP16.84■□□□□ 0.29
LMX1B-204ENST00000561065 A0A1W2PQH9 124 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 SLC9A3R1O14745 358 aaPredicted RBP16.83■□□□□ 0.28
LMX1B-204ENST00000561065 ATG13O75143 517 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 ADH5P11766 374 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 HNRNPLP14866 589 aaKnown RBP eCLIP16.83■□□□□ 0.28
LMX1B-204ENST00000561065 KIF11P52732 1056 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 KDSRQ06136 332 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 SPEM2Q0P670 501 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 MORC3Q14149 939 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 CCDC40Q4G0X9 1142 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 KLHL10Q6JEL2 608 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.83■□□□□ 0.28
LMX1B-204ENST00000561065 SCD5Q86SK9 330 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 ETFBKMTQ8IXQ9 262 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 UBR7Q8N806 425 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 GAB3Q8WWW8 586 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 IPO9Q96P70 1041 aaKnown RBP16.83■□□□□ 0.28
LMX1B-204ENST00000561065 DUSP9Q99956 384 aaKnown RBP16.83■□□□□ 0.28
LMX1B-204ENST00000561065 KLF16Q9BXK1 252 aaPredicted RBP16.83■□□□□ 0.28
LMX1B-204ENST00000561065 DUSP16Q9BY84 665 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 TLR8Q9NR97 1041 aaKnown RBP16.83■□□□□ 0.28
LMX1B-204ENST00000561065 DLL3Q9NYJ7 618 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 USP18Q9UMW8 372 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 SH3BP1Q9Y3L3 701 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 LAMA1P25391 3075 aa16.83■□□□□ 0.28
LMX1B-204ENST00000561065 CCDC163A0A0D9SF12 145 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 ADH1CP00326 375 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 RETP07949 1114 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 EIF2DP41214 584 aaKnown RBP16.82■□□□□ 0.28
LMX1B-204ENST00000561065 YWHAEP62258 255 aaKnown RBP16.82■□□□□ 0.28
LMX1B-204ENST00000561065 PAK1Q13153 545 aa16.82■□□□□ 0.28
LMX1B-204ENST00000561065 RSPO4Q2I0M5 234 aaPredicted RBP16.82■□□□□ 0.28
LMX1B-204ENST00000561065 C2orf27AQ580R0 203 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms