RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 H7C4K7 107 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 MAP2K7O14733 419 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 ZBED1O96006 694 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 BDNFP23560 247 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 ARSEP51690 589 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 CACNA2D1P54289 1103 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 HDAC4P56524 1084 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 SMARCB1Q12824 385 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 CDO1Q16878 200 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 VARS2Q5ST30 1063 aaKnown RBP17.89■□□□□ 0.45
HDDC3-206ENST00000561036 PM20D1Q6GTS8 502 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 ZNF280DQ6N043 979 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 BBS12Q6ZW61 710 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 BEND5Q7L4P6 421 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 BNIPLQ7Z465 357 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 PSTKQ8IV42 348 aaKnown RBP17.89■□□□□ 0.45
HDDC3-206ENST00000561036 IFT81Q8WYA0 676 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 FAM149B1Q96BN6 582 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 KCNK16Q96T55 309 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 TMEM106CQ9BVX2 250 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 VIPAS39Q9H9C1 493 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 POPDC2Q9HBU9 364 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 TMEM30AQ9NV96 361 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 MICAL3Q7RTP6 2002 aa17.89■□□□□ 0.45
HDDC3-206ENST00000561036 CENPFP49454 3210 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 ZSCAN5CA6NGD5 496 aaPredicted RBP17.88■□□□□ 0.45
HDDC3-206ENST00000561036 DGKIO75912 1065 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 GAS8O95995 478 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 KRT10P13645 584 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 NDUFV1P49821 464 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 TFDP2Q14188 446 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 SMTNL2Q2TAL5 461 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 KCNT1Q5JUK3 1230 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 FAM171A1Q5VUB5 890 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 FUT10Q6P4F1 479 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 VSTM1Q6UX27 236 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.88■□□□□ 0.45
HDDC3-206ENST00000561036 DEFB106AQ8N104 65 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 HSPH1Q92598 858 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 VWCEQ96DN2 955 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 TMEM209Q96SK2 561 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 NPY6RQ99463 290 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 CHST7Q9NS84 486 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 TMEM51Q9NW97 253 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 NFU1Q9UMS0 254 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 DRG1Q9Y295 367 aaKnown RBP17.88■□□□□ 0.45
HDDC3-206ENST00000561036 USP3Q9Y6I4 520 aa17.88■□□□□ 0.45
HDDC3-206ENST00000561036 FNDC1Q4ZHG4 1894 aaPredicted RBP17.87■□□□□ 0.45
HDDC3-206ENST00000561036 ESYT3A0FGR9 886 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 DAPK3O43293 454 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 AMHP03971 560 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 MAGEA11P43364 429 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 BCAR1P56945 870 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 CASP8Q14790 479 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 LLGL1Q15334 1064 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 CTXN3Q4LDR2 81 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 SLC39A12Q504Y0 691 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 DCAF6Q58WW2 860 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 ERMARDQ5T6L9 678 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 KAZNQ674X7 775 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 SCYL2Q6P3W7 929 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 NKD2Q969F2 451 aaPredicted RBP17.87■□□□□ 0.45
HDDC3-206ENST00000561036 TOP1MTQ969P6 601 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 ACSF2Q96CM8 615 aaPredicted RBP17.87■□□□□ 0.45
HDDC3-206ENST00000561036 C8orf48Q96LL4 319 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 HINFPQ9BQA5 517 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 TRIM51Q9BSJ1 452 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 GPR62Q9BZJ7 368 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 ACBD3Q9H3P7 528 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 PRDM16Q9HAZ2 1276 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.87■□□□□ 0.45
HDDC3-206ENST00000561036 FAM53CQ9NYF3 392 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 R3HDM2Q9Y2K5 976 aaKnown RBP17.87■□□□□ 0.45
HDDC3-206ENST00000561036 PCDHB5Q9Y5E4 795 aa17.87■□□□□ 0.45
HDDC3-206ENST00000561036 LIASO43766 372 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 LTFP02788 710 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 TNNT3P45378 269 aaPredicted RBP17.86■□□□□ 0.45
HDDC3-206ENST00000561036 KCNJ1P48048 391 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 ALDH7A1P49419 539 aaKnown RBP17.86■□□□□ 0.45
HDDC3-206ENST00000561036 SULT1E1P49888 294 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 AIF1P55008 147 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 CDH6P55285 790 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 SNX1Q13596 522 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 PTK6Q13882 451 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 DPYSL3Q14195 570 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 HLTFQ14527 1009 aaKnown RBP eCLIP17.86■□□□□ 0.45
HDDC3-206ENST00000561036 KRT81Q14533 505 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 PPP1R7Q15435 360 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 MFSD5Q6N075 450 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 ANKS3Q6ZW76 656 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 GPRIN1Q7Z2K8 1008 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 GSPT2Q8IYD1 628 aaKnown RBP17.86■□□□□ 0.45
HDDC3-206ENST00000561036 TMEM199Q8N511 208 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 MREGQ8N565 214 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 CCHCR1Q8TD31 782 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 ATG4AQ8WYN0 398 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 PGAP3Q96FM1 320 aaPredicted RBP17.86■□□□□ 0.45
HDDC3-206ENST00000561036 SLC9A7Q96T83 725 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 ZNF670Q9BS34 389 aa17.86■□□□□ 0.45
HDDC3-206ENST00000561036 SNRNP25Q9BV90 132 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms