RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 SPATA17Q96L03 361 aa17.38■□□□□ 0.37
TPM1-219ENST00000559397 GUCD1Q96NT3 240 aa17.38■□□□□ 0.37
TPM1-219ENST00000559397 GAS2L1Q99501 681 aaPredicted RBP17.38■□□□□ 0.37
TPM1-219ENST00000559397 CDX2Q99626 313 aaPredicted RBP17.38■□□□□ 0.37
TPM1-219ENST00000559397 PNPLA8Q9NP80 782 aa17.38■□□□□ 0.37
TPM1-219ENST00000559397 INSL5Q9Y5Q6 135 aa17.38■□□□□ 0.37
TPM1-219ENST00000559397 GREB1Q4ZG55 1949 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 KCNK3O14649 394 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 TNFRSF10BO14763 440 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 GABBR2O75899 941 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 GLP2RO95838 553 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 IGFBP4P22692 258 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 SLC8A3P57103 927 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 RPL10AP62906 217 aaKnown RBP17.37■□□□□ 0.37
TPM1-219ENST00000559397 TWF1Q12792 350 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 PDCLQ13371 301 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 MAMLD1Q13495 774 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 MESDQ14696 234 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 TEX35Q5T0J7 233 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 TMEM184AQ6ZMB5 413 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 CCDC149Q6ZUS6 474 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 STK32AQ8WU08 396 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 KCTD13Q8WZ19 329 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 CD101Q93033 1021 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 CEP295NLQ96MC4 621 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 SLC4A5Q9BY07 1137 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 IGFLR1Q9H665 355 aa17.37■□□□□ 0.37
TPM1-219ENST00000559397 MRPL47Q9HD33 250 aaKnown RBP17.37■□□□□ 0.37
TPM1-219ENST00000559397 MIF4GDA9UHW6 222 aaKnown RBP17.36■□□□□ 0.37
TPM1-219ENST00000559397 COMTP21964 271 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 PAFAH1B1P43034 410 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 C2CD6Q53TS8 623 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 RAB41Q5JT25 222 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 GPRIN1Q7Z2K8 1008 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 GPR161Q8N6U8 529 aaKnown RBP17.36■□□□□ 0.37
TPM1-219ENST00000559397 NOA1Q8NC60 698 aaKnown RBP17.36■□□□□ 0.37
TPM1-219ENST00000559397 MYLIPQ8WY64 445 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 MS4A14Q96JA4 679 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 HSFY1Q96LI6 401 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 PARVAQ9NVD7 372 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 DPP7Q9UHL4 492 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 SCINQ9Y6U3 715 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 EYSQ5T1H1 3165 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 LINC01565O15544 149 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 ZMYND10O75800 440 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 PAPLNO95428 1278 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 ALDH1A3P47895 512 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 RGS7P49802 495 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 DNA2P51530 1060 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 PTPN20Q4JDL3 420 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 ERICH1Q86X53 443 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 RASGEF1CQ8N431 466 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 DEFB123Q8N688 67 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 SPATA4Q8NEY3 305 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 ACTRT1Q8TDG2 376 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 GPR152Q8TDT2 470 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 GIPC2Q8TF65 315 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 BTBD6Q96KE9 485 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 CPXM1Q96SM3 734 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 IL37Q9NZH6 218 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 ANAPC7Q9UJX3 599 aa17.36■□□□□ 0.37
TPM1-219ENST00000559397 RFPL2O75678 378 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 CTNNA2P26232 953 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 HOXA9P31269 272 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 GSCP56915 257 aaPredicted RBP17.35■□□□□ 0.37
TPM1-219ENST00000559397 PLD1Q13393 1074 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 ADAM15Q13444 863 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 COL19A1Q14993 1142 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 CTC1Q2NKJ3 1217 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 PPM1LQ5SGD2 360 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 PPP1R15BQ5SWA1 713 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 CCDC181Q5TID7 509 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 TMEM110Q86TL2 294 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 NUP93Q8N1F7 819 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 STKLD1Q8NE28 680 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 CASP10Q92851 521 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 SELENOOQ9BVL4 669 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 TRIM7Q9C029 511 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 CARD9Q9H257 536 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 CYLDQ9NQC7 956 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 MTMR10Q9NXD2 777 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 EHD2Q9NZN4 543 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 TJP2Q9UDY2 1190 aa17.35■□□□□ 0.37
TPM1-219ENST00000559397 TTC7AQ9ULT0 858 aaPredicted RBP17.35■□□□□ 0.37
TPM1-219ENST00000559397 SLC38A8A6NNN8 435 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 TMEM110-MUSTN1A8MSY1 372 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 PROSCO94903 275 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 PEX5P50542 639 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 SLC5A3P53794 718 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 MTMR3Q13615 1198 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 DENND5BQ6ZUT9 1274 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 PHLDB2Q86SQ0 1253 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 MMGT1Q8N4V1 131 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 SCAMP5Q8TAC9 235 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 FEZF2Q8TBJ5 459 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 ZDHHC7Q9NXF8 308 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 SMARCAL1Q9NZC9 954 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 STRIP2Q9ULQ0 834 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 USP3Q9Y6I4 520 aa17.34■□□□□ 0.37
TPM1-219ENST00000559397 ZNF638Q14966 1978 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms