RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 KRBA2Q6ZNG9 492 aa12.21□□□□□ -0.45
CASC4-205ENST00000558735 UNC93AQ86WB7 457 aa12.21□□□□□ -0.45
CASC4-205ENST00000558735 USP33Q8TEY7 942 aa12.21□□□□□ -0.45
CASC4-205ENST00000558735 OVCA2Q8WZ82 227 aa12.21□□□□□ -0.45
CASC4-205ENST00000558735 TAF4BQ92750 862 aa12.21□□□□□ -0.45
CASC4-205ENST00000558735 FBXO32Q969P5 355 aa12.21□□□□□ -0.45
CASC4-205ENST00000558735 WBP2Q969T9 261 aa12.21□□□□□ -0.45
CASC4-205ENST00000558735 SMARCD1Q96GM5 515 aa12.21□□□□□ -0.45
CASC4-205ENST00000558735 ZFRQ96KR1 1074 aaKnown RBP12.21□□□□□ -0.45
CASC4-205ENST00000558735 HHIPQ96QV1 700 aa12.21□□□□□ -0.45
CASC4-205ENST00000558735 GOLPH3LQ9H4A5 285 aa12.21□□□□□ -0.45
CASC4-205ENST00000558735 CSNK1G1Q9HCP0 422 aa12.21□□□□□ -0.45
CASC4-205ENST00000558735 DMAP1Q9NPF5 467 aaPredicted RBP12.21□□□□□ -0.45
CASC4-205ENST00000558735 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.21□□□□□ -0.453e-10■■■■■ 130.4
CASC4-205ENST00000558735 COMMD8Q9NX08 183 aa12.21□□□□□ -0.45
CASC4-205ENST00000558735 HMGXB4Q9UGU5 601 aa12.21□□□□□ -0.45
CASC4-205ENST00000558735 FRMD4BQ9Y2L6 1034 aa12.21□□□□□ -0.45
CASC4-205ENST00000558735 A0A0A0MRY4 1105 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 A0A1W2PQ27 194 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 A0A1W2PQ64 194 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 A0A1W2PQD8 194 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 E2F8A0AVK6 867 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 BCLAF3A2AJT9 711 aaKnown RBP12.2□□□□□ -0.46
CASC4-205ENST00000558735 SLC9A3R1O14745 358 aaPredicted RBP12.2□□□□□ -0.46
CASC4-205ENST00000558735 AP1G2O75843 785 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 RHOBTB1O94844 696 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 P4HA1P13674 534 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 CEACAM1P13688 526 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 CSRP1P21291 193 aaKnown RBP12.2□□□□□ -0.46
CASC4-205ENST00000558735 NR2F2P24468 414 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 ASPAP45381 313 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 GCLMP48507 274 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 NOVA1P51513 510 aaKnown RBP12.2□□□□□ -0.46
CASC4-205ENST00000558735 SLC5A3P53794 718 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 MAP3K7CLP57077 242 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 PPP3CAQ08209 521 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 C2orf27AQ580R0 203 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 HECTD3Q5T447 861 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 EMC10Q5UCC4 262 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 SFTPA1Q8IWL2 248 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 GUF1Q8N442 669 aaKnown RBP12.2□□□□□ -0.46
CASC4-205ENST00000558735 PDZD8Q8NEN9 1154 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 SLC2A14Q8TDB8 520 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 GATA6Q92908 595 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 TWNKQ96RR1 684 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 SCAND2PQ9GZW5 306 aaPredicted RBP12.2□□□□□ -0.46
CASC4-205ENST00000558735 SMOC1Q9H4F8 434 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 CCSER2Q9H7U1 834 aa12.2□□□□□ -0.46
CASC4-205ENST00000558735 APOBEC3GQ9HC16 384 aaKnown RBP12.2□□□□□ -0.46
CASC4-205ENST00000558735 ATP8B3O60423 1300 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 HHLA1C9JL84 531 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 DCLK1O15075 740 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 CLSTN1O94985 981 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 KIF20AO95235 890 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 TRIM49P0CI25 452 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 TRIM49CP0CI26 452 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 CHRM1P11229 460 aaPredicted RBP12.19□□□□□ -0.46
CASC4-205ENST00000558735 HOXB3P14651 431 aaPredicted RBP12.19□□□□□ -0.46
CASC4-205ENST00000558735 ADAM9Q13443 819 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 ELF2Q15723 593 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 LY6G5CQ5SRR4 150 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 DAB2IPQ5VWQ8 1189 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 TCEAL6Q6IPX3 200 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 C12orf40Q86WS4 652 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 DDX42Q86XP3 938 aaKnown RBP eCLIP12.19□□□□□ -0.46
CASC4-205ENST00000558735 CCDC33Q8N5R6 958 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 TAS1R2Q8TE23 839 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 WHAMMQ8TF30 809 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 TCEAL3Q969E4 200 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 CCDC47Q96A33 483 aaKnown RBP12.19□□□□□ -0.46
CASC4-205ENST00000558735 CYFIP2Q96F07 1278 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 PNKPQ96T60 521 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 HNRNPABQ99729 332 aaKnown RBP12.19□□□□□ -0.46
CASC4-205ENST00000558735 EDEM2Q9BV94 578 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 ADAM33Q9BZ11 813 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 GDPD2Q9HCC8 539 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 KRT82Q9NSB4 513 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 GMIPQ9P107 970 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 TBC1D14Q9P2M4 693 aa12.19□□□□□ -0.46
CASC4-205ENST00000558735 LNP1A1A4G5 178 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 C4orf47A7E2U8 309 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 GIPC1O14908 333 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 APBB3O95704 486 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 CAVIN2O95810 425 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 TBX18O95935 607 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 HNRNPLP14866 589 aaKnown RBP eCLIP12.18□□□□□ -0.469e-11■■■■□ 24.8
CASC4-205ENST00000558735 RPL13P26373 211 aaKnown RBP12.18□□□□□ -0.46
CASC4-205ENST00000558735 ADORA2BP29275 332 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 PSMC2P35998 433 aaKnown RBP12.18□□□□□ -0.46
CASC4-205ENST00000558735 PIK3CAP42336 1068 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 TUBP50607 506 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 SEC13P55735 322 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 MRPS21P82921 87 aaKnown RBP12.18□□□□□ -0.46
CASC4-205ENST00000558735 ENPEPQ07075 957 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 ZNF252P-AS1Q0IIN9 211 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 INCA1Q0VD86 236 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 ZCWPW2Q504Y3 356 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 TMEM92Q6UXU6 159 aa12.18□□□□□ -0.46
CASC4-205ENST00000558735 INTS8Q75QN2 995 aaKnown RBP12.18□□□□□ -0.46
CASC4-205ENST00000558735 GPRIN1Q7Z2K8 1008 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms