RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 GCNAQ96QF7 691 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 TTLL2Q9BWV7 592 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 PACSIN1Q9BY11 444 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 ULBP1Q9BZM6 244 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 LACRTQ9GZZ8 138 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 ABCC13Q9NSE7 274 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 TMEM30AQ9NV96 361 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 ZDHHC7Q9NXF8 308 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 CLIC5Q9NZA1 410 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 ANAPC7Q9UJX3 599 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 SLC27A5Q9Y2P5 690 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.01□□□□□ -0.33
TPM1-209ENST00000558072 YIPF1Q9Y548 306 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 INSL5Q9Y5Q6 135 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 TMEM191CA6NGB0 347 aa13□□□□□ -0.33
TPM1-209ENST00000558072 SPDYE4A6NLX3 237 aa13□□□□□ -0.33
TPM1-209ENST00000558072 SLC38A8A6NNN8 435 aa13□□□□□ -0.33
TPM1-209ENST00000558072 SOBPA7XYQ1 873 aa13□□□□□ -0.33
TPM1-209ENST00000558072 GOLGA8SH3BPF8 625 aa13□□□□□ -0.33
TPM1-209ENST00000558072 TULP2O00295 520 aa13□□□□□ -0.33
TPM1-209ENST00000558072 LINC01565O15544 149 aa13□□□□□ -0.33
TPM1-209ENST00000558072 CLASP2O75122 1294 aaKnown RBP13□□□□□ -0.33
TPM1-209ENST00000558072 BEST1O76090 585 aa13□□□□□ -0.33
TPM1-209ENST00000558072 SEC24AO95486 1093 aa13□□□□□ -0.33
TPM1-209ENST00000558072 LTFP02788 710 aa13□□□□□ -0.33
TPM1-209ENST00000558072 EPCAMP16422 314 aa13□□□□□ -0.33
TPM1-209ENST00000558072 PFKLP17858 780 aa13□□□□□ -0.33
TPM1-209ENST00000558072 GPD1P21695 349 aa13□□□□□ -0.33
TPM1-209ENST00000558072 IGFBP4P22692 258 aa13□□□□□ -0.33
TPM1-209ENST00000558072 SDC4P31431 198 aa13□□□□□ -0.33
TPM1-209ENST00000558072 GBP1P32455 592 aa13□□□□□ -0.33
TPM1-209ENST00000558072 NOS2P35228 1153 aa13□□□□□ -0.33
TPM1-209ENST00000558072 MATKP42679 507 aa13□□□□□ -0.33
TPM1-209ENST00000558072 NRIP1P48552 1158 aa13□□□□□ -0.33
TPM1-209ENST00000558072 KPNA1P52294 538 aaPredicted RBP13□□□□□ -0.33
TPM1-209ENST00000558072 ZNF143P52747 638 aaPredicted RBP13□□□□□ -0.33
TPM1-209ENST00000558072 HADHQ16836 314 aaKnown RBP13□□□□□ -0.33
TPM1-209ENST00000558072 TCEAL5Q5H9L2 206 aa13□□□□□ -0.33
TPM1-209ENST00000558072 PPP1R15BQ5SWA1 713 aa13□□□□□ -0.33
TPM1-209ENST00000558072 CYP4A22Q5TCH4 519 aa13□□□□□ -0.33
TPM1-209ENST00000558072 BTBD8Q5XKL5 378 aa13□□□□□ -0.33
TPM1-209ENST00000558072 DAAM2Q86T65 1068 aa13□□□□□ -0.33
TPM1-209ENST00000558072 DNAAF5Q86Y56 855 aa13□□□□□ -0.33
TPM1-209ENST00000558072 ZNF276Q8N554 614 aa13□□□□□ -0.33
TPM1-209ENST00000558072 TPCN2Q8NHX9 752 aa13□□□□□ -0.33
TPM1-209ENST00000558072 RNF139Q8WU17 664 aa13□□□□□ -0.33
TPM1-209ENST00000558072 FBXO32Q969P5 355 aa13□□□□□ -0.33
TPM1-209ENST00000558072 PSMG2Q969U7 264 aa13□□□□□ -0.33
TPM1-209ENST00000558072 GUCD1Q96NT3 240 aa13□□□□□ -0.33
TPM1-209ENST00000558072 CNPY3Q9BT09 278 aa13□□□□□ -0.33
TPM1-209ENST00000558072 NSUN3Q9H649 340 aaKnown RBP13□□□□□ -0.33
TPM1-209ENST00000558072 IGFLR1Q9H665 355 aa13□□□□□ -0.33
TPM1-209ENST00000558072 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13□□□□□ -0.33
TPM1-209ENST00000558072 EIF2AK3Q9NZJ5 1116 aaKnown RBP13□□□□□ -0.33
TPM1-209ENST00000558072 TRPM5Q9NZQ8 1165 aa13□□□□□ -0.33
TPM1-209ENST00000558072 JRKLQ9Y4A0 524 aa13□□□□□ -0.33
TPM1-209ENST00000558072 TCRBV5S1A1TA0A578 114 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 RCCD1A6NED2 376 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 MIF4GDA9UHW6 222 aaKnown RBP12.99□□□□□ -0.33
TPM1-209ENST00000558072 DPYSL4O14531 572 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 DAB1O75553 588 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 ZMYND10O75800 440 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 C8AP07357 584 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 USP17L7P0C7H9 530 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 PDGFRAP16234 1089 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 CDC25CP30307 473 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 PTPN9P43378 593 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 GNG11P61952 73 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 ETF1P62495 437 aaKnown RBP12.99□□□□□ -0.33
TPM1-209ENST00000558072 TWF1Q12792 350 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 TUBB2AQ13885 445 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 CLUL1Q15846 466 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 DUSP6Q16828 381 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 ZNF569Q5MCW4 686 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 ACBD5Q5T8D3 534 aaPredicted RBP12.99□□□□□ -0.33
TPM1-209ENST00000558072 GPR153Q6NV75 609 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 SND1Q7KZF4 910 aaKnown RBP eCLIP12.99□□□□□ -0.33
TPM1-209ENST00000558072 NIPA2Q8N8Q9 360 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 SLC7A14Q8TBB6 771 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 GPR152Q8TDT2 470 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 SLC22A17Q8WUG5 538 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 ARHGEF26Q96DR7 871 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 MCEEQ96PE7 176 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 TUBB2BQ9BVA1 445 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 METTL5Q9NRN9 209 aaKnown RBP12.99□□□□□ -0.33
TPM1-209ENST00000558072 CDH22Q9UJ99 828 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 TMEM59LQ9UK28 342 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 AMFRQ9UKV5 643 aa12.99□□□□□ -0.33
TPM1-209ENST00000558072 CLUHO75153 1309 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 PATJQ8NI35 1801 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 C2CD4BA6NLJ0 364 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 ZNF197O14709 1029 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 BUB1O43683 1085 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 SPOPO43791 374 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 PROSCO94903 275 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 PSMA2P25787 234 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 PCK1P35558 622 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 CETN2P41208 172 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 TUBP50607 506 aa12.98□□□□□ -0.33
TPM1-209ENST00000558072 AIF1P55008 147 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms